Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC17.4■□□□□ 0.38
ATP2A3Q93084 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ATP2A3Q93084 DUX4L17-201ENST00000557360 1267 ntBASIC17.4■□□□□ 0.38
ATP2A3Q93084 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC17.4■□□□□ 0.38
ATP2A3Q93084 AC091167.2-201ENST00000579581 588 ntBASIC17.4■□□□□ 0.38
ATP2A3Q93084 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC17.4■□□□□ 0.38
ATP2A3Q93084 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC17.4■□□□□ 0.38
ATP2A3Q93084 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
ATP2A3Q93084 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATP2A3Q93084 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ATP2A3Q93084 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
ATP2A3Q93084 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATP2A3Q93084 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATP2A3Q93084 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.4■□□□□ 0.38
ATP2A3Q93084 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ATP2A3Q93084 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC17.4■□□□□ 0.38
ATP2A3Q93084 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.4■□□□□ 0.38
ATP2A3Q93084 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ATP2A3Q93084 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.38
ATP2A3Q93084 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
ATP2A3Q93084 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
ATP2A3Q93084 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
ATP2A3Q93084 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
ATP2A3Q93084 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ATP2A3Q93084 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
ATP2A3Q93084 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.39■□□□□ 0.37
ATP2A3Q93084 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.39■□□□□ 0.37
ATP2A3Q93084 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ATP2A3Q93084 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ATP2A3Q93084 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ATP2A3Q93084 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
ATP2A3Q93084 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
ATP2A3Q93084 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
ATP2A3Q93084 AC005915.1-201ENST00000624912 2018 ntBASIC17.39■□□□□ 0.37
ATP2A3Q93084 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.39■□□□□ 0.37
ATP2A3Q93084 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ATP2A3Q93084 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.39■□□□□ 0.37
ATP2A3Q93084 WDR53-203ENST00000429115 683 ntTSL 2 BASIC17.39■□□□□ 0.37
ATP2A3Q93084 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
ATP2A3Q93084 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
ATP2A3Q93084 CNN2P2-201ENST00000443536 909 ntBASIC17.39■□□□□ 0.37
ATP2A3Q93084 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.39■□□□□ 0.37
ATP2A3Q93084 CNN2P3-201ENST00000450201 906 ntBASIC17.39■□□□□ 0.37
ATP2A3Q93084 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
ATP2A3Q93084 SLBP-205ENST00000488267 987 ntTSL 2 BASIC17.39■□□□□ 0.37
ATP2A3Q93084 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC17.39■□□□□ 0.37
ATP2A3Q93084 SPCS2P1-201ENST00000561636 679 ntBASIC17.39■□□□□ 0.37
ATP2A3Q93084 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC17.39■□□□□ 0.37
ATP2A3Q93084 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC17.39■□□□□ 0.37
ATP2A3Q93084 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC17.39■□□□□ 0.37
ATP2A3Q93084 AL136317.3-201ENST00000618497 906 ntBASIC17.39■□□□□ 0.37
ATP2A3Q93084 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
ATP2A3Q93084 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ATP2A3Q93084 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ATP2A3Q93084 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ATP2A3Q93084 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ATP2A3Q93084 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ATP2A3Q93084 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
ATP2A3Q93084 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ATP2A3Q93084 TOP3BP1-201ENST00000420768 1380 ntBASIC17.39■□□□□ 0.37
ATP2A3Q93084 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ATP2A3Q93084 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ATP2A3Q93084 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17.39■□□□□ 0.37
ATP2A3Q93084 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.39■□□□□ 0.37
ATP2A3Q93084 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.38■□□□□ 0.37
ATP2A3Q93084 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATP2A3Q93084 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.38■□□□□ 0.37
ATP2A3Q93084 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
ATP2A3Q93084 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATP2A3Q93084 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.38■□□□□ 0.37
ATP2A3Q93084 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
ATP2A3Q93084 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATP2A3Q93084 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ATP2A3Q93084 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC17.38■□□□□ 0.37
ATP2A3Q93084 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC17.38■□□□□ 0.37
ATP2A3Q93084 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC17.38■□□□□ 0.37
ATP2A3Q93084 HLA-DRB6-201ENST00000411500 1235 ntBASIC17.38■□□□□ 0.37
ATP2A3Q93084 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC17.38■□□□□ 0.37
ATP2A3Q93084 AC069335.1-201ENST00000489972 472 ntBASIC17.38■□□□□ 0.37
ATP2A3Q93084 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ATP2A3Q93084 IGHV3-62-201ENST00000520057 340 ntBASIC17.38■□□□□ 0.37
ATP2A3Q93084 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC17.38■□□□□ 0.37
ATP2A3Q93084 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC17.38■□□□□ 0.37
ATP2A3Q93084 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
ATP2A3Q93084 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATP2A3Q93084 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATP2A3Q93084 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATP2A3Q93084 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATP2A3Q93084 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.38■□□□□ 0.37
ATP2A3Q93084 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATP2A3Q93084 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATP2A3Q93084 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
ATP2A3Q93084 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
ATP2A3Q93084 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATP2A3Q93084 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATP2A3Q93084 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATP2A3Q93084 UBALD1-205ENST00000590891 2641 ntBASIC17.37■□□□□ 0.37
ATP2A3Q93084 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATP2A3Q93084 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
ATP2A3Q93084 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms