Protein–RNA interactions for Protein: Q93038

TNFRSF25, Tumor necrosis factor receptor superfamily member 25, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25Q93038 MIR4321-201ENST00000592276 80 ntBASIC18.64■□□□□ 0.57
TNFRSF25Q93038 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC18.64■□□□□ 0.57
TNFRSF25Q93038 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
TNFRSF25Q93038 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC18.64■□□□□ 0.57
TNFRSF25Q93038 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TNFRSF25Q93038 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC18.64■□□□□ 0.57
TNFRSF25Q93038 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TNFRSF25Q93038 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TNFRSF25Q93038 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
TNFRSF25Q93038 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
TNFRSF25Q93038 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TNFRSF25Q93038 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
TNFRSF25Q93038 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC18.63■□□□□ 0.57
TNFRSF25Q93038 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TNFRSF25Q93038 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TNFRSF25Q93038 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TNFRSF25Q93038 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC18.63■□□□□ 0.57
TNFRSF25Q93038 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
TNFRSF25Q93038 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
TNFRSF25Q93038 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TNFRSF25Q93038 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC18.63■□□□□ 0.57
TNFRSF25Q93038 AL365203.3-201ENST00000609742 2057 ntBASIC18.63■□□□□ 0.57
TNFRSF25Q93038 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TNFRSF25Q93038 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TNFRSF25Q93038 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TNFRSF25Q93038 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TNFRSF25Q93038 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC18.63■□□□□ 0.57
TNFRSF25Q93038 MIR648-201ENST00000385046 94 ntBASIC18.63■□□□□ 0.57
TNFRSF25Q93038 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TNFRSF25Q93038 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TNFRSF25Q93038 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC18.63■□□□□ 0.57
TNFRSF25Q93038 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC18.63■□□□□ 0.57
TNFRSF25Q93038 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TNFRSF25Q93038 DHDH-204ENST00000523250 634 ntTSL 5 BASIC18.63■□□□□ 0.57
TNFRSF25Q93038 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC18.63■□□□□ 0.57
TNFRSF25Q93038 SLC25A39P2-201ENST00000537614 270 ntBASIC18.63■□□□□ 0.57
TNFRSF25Q93038 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC18.63■□□□□ 0.57
TNFRSF25Q93038 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC18.63■□□□□ 0.57
TNFRSF25Q93038 AC092865.5-201ENST00000545435 363 ntBASIC18.63■□□□□ 0.57
TNFRSF25Q93038 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TNFRSF25Q93038 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC18.63■□□□□ 0.57
TNFRSF25Q93038 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
TNFRSF25Q93038 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
TNFRSF25Q93038 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC18.63■□□□□ 0.57
TNFRSF25Q93038 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC18.63■□□□□ 0.57
TNFRSF25Q93038 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC18.63■□□□□ 0.57
TNFRSF25Q93038 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TNFRSF25Q93038 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
TNFRSF25Q93038 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TNFRSF25Q93038 AC069224.1-201ENST00000566372 1715 ntBASIC18.63■□□□□ 0.57
TNFRSF25Q93038 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TNFRSF25Q93038 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TNFRSF25Q93038 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC18.62■□□□□ 0.57
TNFRSF25Q93038 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC18.62■□□□□ 0.57
TNFRSF25Q93038 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.62■□□□□ 0.57
TNFRSF25Q93038 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TNFRSF25Q93038 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TNFRSF25Q93038 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TNFRSF25Q93038 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
TNFRSF25Q93038 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
TNFRSF25Q93038 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TNFRSF25Q93038 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC18.62■□□□□ 0.57
TNFRSF25Q93038 FAM220BP-201ENST00000377689 816 ntBASIC18.62■□□□□ 0.57
TNFRSF25Q93038 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC18.62■□□□□ 0.57
TNFRSF25Q93038 GPS2P2-201ENST00000430745 888 ntBASIC18.62■□□□□ 0.57
TNFRSF25Q93038 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC18.62■□□□□ 0.57
TNFRSF25Q93038 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC18.62■□□□□ 0.57
TNFRSF25Q93038 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC18.62■□□□□ 0.57
TNFRSF25Q93038 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TNFRSF25Q93038 MIR3687-2-201ENST00000577708 61 ntBASIC18.62■□□□□ 0.57
TNFRSF25Q93038 AL365330.1-201ENST00000607459 531 ntBASIC18.62■□□□□ 0.57
TNFRSF25Q93038 MIR3687-1-201ENST00000614492 61 ntBASIC18.62■□□□□ 0.57
TNFRSF25Q93038 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TNFRSF25Q93038 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TNFRSF25Q93038 CDC14C-201ENST00000428251 1719 ntBASIC18.62■□□□□ 0.57
TNFRSF25Q93038 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
TNFRSF25Q93038 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TNFRSF25Q93038 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TNFRSF25Q93038 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC18.62■□□□□ 0.57
TNFRSF25Q93038 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC18.62■□□□□ 0.57
TNFRSF25Q93038 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
TNFRSF25Q93038 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC18.62■□□□□ 0.57
TNFRSF25Q93038 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TNFRSF25Q93038 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC18.61■□□□□ 0.57
TNFRSF25Q93038 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TNFRSF25Q93038 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC18.61■□□□□ 0.57
TNFRSF25Q93038 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TNFRSF25Q93038 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC18.61■□□□□ 0.57
TNFRSF25Q93038 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TNFRSF25Q93038 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TNFRSF25Q93038 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC18.61■□□□□ 0.57
TNFRSF25Q93038 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TNFRSF25Q93038 AC112504.1-201ENST00000623415 1841 ntBASIC18.61■□□□□ 0.57
TNFRSF25Q93038 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
TNFRSF25Q93038 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TNFRSF25Q93038 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
TNFRSF25Q93038 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TNFRSF25Q93038 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
TNFRSF25Q93038 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC18.61■□□□□ 0.57
TNFRSF25Q93038 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms