Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 AL353801.3-201ENST00000609898 542 ntBASIC15.2■□□□□ 0.02
HPS1Q92902 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HPS1Q92902 AL031008.1-201ENST00000619963 541 ntBASIC15.2■□□□□ 0.02
HPS1Q92902 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC15.2■□□□□ 0.02
HPS1Q92902 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HPS1Q92902 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
HPS1Q92902 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HPS1Q92902 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HPS1Q92902 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HPS1Q92902 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC15.2■□□□□ 0.02
HPS1Q92902 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HPS1Q92902 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HPS1Q92902 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HPS1Q92902 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HPS1Q92902 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HPS1Q92902 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
HPS1Q92902 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HPS1Q92902 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
HPS1Q92902 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HPS1Q92902 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC15.2■□□□□ 0.02
HPS1Q92902 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC15.2■□□□□ 0.02
HPS1Q92902 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HPS1Q92902 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HPS1Q92902 AC026748.1-201ENST00000624349 3251 ntBASIC15.19■□□□□ 0.02
HPS1Q92902 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HPS1Q92902 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC15.19■□□□□ 0.02
HPS1Q92902 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
HPS1Q92902 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
HPS1Q92902 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
HPS1Q92902 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HPS1Q92902 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC15.19■□□□□ 0.02
HPS1Q92902 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HPS1Q92902 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
HPS1Q92902 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HPS1Q92902 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HPS1Q92902 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
HPS1Q92902 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.19■□□□□ 0.02
HPS1Q92902 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HPS1Q92902 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC15.19■□□□□ 0.02
HPS1Q92902 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
HPS1Q92902 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HPS1Q92902 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HPS1Q92902 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
HPS1Q92902 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC15.19■□□□□ 0.02
HPS1Q92902 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
HPS1Q92902 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HPS1Q92902 AC106795.1-205ENST00000512851 1056 ntBASIC15.19■□□□□ 0.02
HPS1Q92902 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC15.19■□□□□ 0.02
HPS1Q92902 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC15.19■□□□□ 0.02
HPS1Q92902 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HPS1Q92902 AL121912.1-201ENST00000603683 238 ntBASIC15.19■□□□□ 0.02
HPS1Q92902 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC15.19■□□□□ 0.02
HPS1Q92902 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HPS1Q92902 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
HPS1Q92902 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
HPS1Q92902 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HPS1Q92902 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
HPS1Q92902 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
HPS1Q92902 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HPS1Q92902 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC15.19■□□□□ 0.02
HPS1Q92902 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
HPS1Q92902 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC15.19■□□□□ 0.02
HPS1Q92902 RHBDF1P1-201ENST00000427504 1941 ntBASIC15.19■□□□□ 0.02
HPS1Q92902 MIR600HG-201ENST00000449175 5984 ntBASIC15.19■□□□□ 0.02
HPS1Q92902 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HPS1Q92902 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HPS1Q92902 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HPS1Q92902 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HPS1Q92902 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
HPS1Q92902 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC15.19■□□□□ 0.02
HPS1Q92902 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC15.19■□□□□ 0.02
HPS1Q92902 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HPS1Q92902 SBF1P1-201ENST00000444527 5631 ntBASIC15.18■□□□□ 0.02
HPS1Q92902 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HPS1Q92902 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC15.18■□□□□ 0.02
HPS1Q92902 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC15.18■□□□□ 0.02
HPS1Q92902 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC15.18■□□□□ 0.02
HPS1Q92902 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC15.18■□□□□ 0.02
HPS1Q92902 NSUN5P1-202ENST00000421140 1535 ntBASIC15.18■□□□□ 0.02
HPS1Q92902 NSUN5P2-203ENST00000457352 1529 ntBASIC15.18■□□□□ 0.02
HPS1Q92902 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
HPS1Q92902 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
HPS1Q92902 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HPS1Q92902 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC15.18■□□□□ 0.02
HPS1Q92902 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
HPS1Q92902 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
HPS1Q92902 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
HPS1Q92902 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC15.18■□□□□ 0.02
HPS1Q92902 MINOS1P3-201ENST00000457048 203 ntBASIC15.18■□□□□ 0.02
HPS1Q92902 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC15.18■□□□□ 0.02
HPS1Q92902 CDV3-207ENST00000508481 661 ntTSL 3 BASIC15.18■□□□□ 0.02
HPS1Q92902 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC15.18■□□□□ 0.02
HPS1Q92902 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HPS1Q92902 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HPS1Q92902 AC013268.4-201ENST00000637413 2228 ntBASIC15.18■□□□□ 0.02
HPS1Q92902 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
HPS1Q92902 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
HPS1Q92902 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
HPS1Q92902 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC15.18■□□□□ 0.02
HPS1Q92902 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms