Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
USP6NLQ92738 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
USP6NLQ92738 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC18.53■□□□□ 0.56
USP6NLQ92738 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
USP6NLQ92738 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
USP6NLQ92738 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
USP6NLQ92738 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
USP6NLQ92738 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
USP6NLQ92738 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC18.53■□□□□ 0.56
USP6NLQ92738 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
USP6NLQ92738 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
USP6NLQ92738 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
USP6NLQ92738 RAD18-204ENST00000418463 563 ntTSL 4 BASIC18.53■□□□□ 0.56
USP6NLQ92738 RAD18-205ENST00000421052 582 ntTSL 3 BASIC18.53■□□□□ 0.56
USP6NLQ92738 RHOA-206ENST00000454011 889 ntTSL 2 BASIC18.53■□□□□ 0.56
USP6NLQ92738 FADS2-205ENST00000517839 469 ntTSL 3 BASIC18.53■□□□□ 0.56
USP6NLQ92738 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC18.53■□□□□ 0.56
USP6NLQ92738 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC18.53■□□□□ 0.56
USP6NLQ92738 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC18.53■□□□□ 0.56
USP6NLQ92738 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
USP6NLQ92738 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC18.53■□□□□ 0.56
USP6NLQ92738 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC18.53■□□□□ 0.56
USP6NLQ92738 AL512652.2-201ENST00000625156 1716 ntBASIC18.53■□□□□ 0.56
USP6NLQ92738 AL033527.4-201ENST00000641026 673 ntBASIC18.53■□□□□ 0.56
USP6NLQ92738 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
USP6NLQ92738 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
USP6NLQ92738 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.53■□□□□ 0.56
USP6NLQ92738 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.53■□□□□ 0.56
USP6NLQ92738 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
USP6NLQ92738 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18.53■□□□□ 0.56
USP6NLQ92738 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC18.53■□□□□ 0.56
USP6NLQ92738 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
USP6NLQ92738 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.53■□□□□ 0.56
USP6NLQ92738 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
USP6NLQ92738 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
USP6NLQ92738 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
USP6NLQ92738 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
USP6NLQ92738 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC18.52■□□□□ 0.56
USP6NLQ92738 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
USP6NLQ92738 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
USP6NLQ92738 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
USP6NLQ92738 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
USP6NLQ92738 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
USP6NLQ92738 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC18.52■□□□□ 0.56
USP6NLQ92738 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
USP6NLQ92738 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
USP6NLQ92738 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC18.52■□□□□ 0.56
USP6NLQ92738 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
USP6NLQ92738 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC18.52■□□□□ 0.56
USP6NLQ92738 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
USP6NLQ92738 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC18.52■□□□□ 0.56
USP6NLQ92738 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC18.52■□□□□ 0.56
USP6NLQ92738 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
USP6NLQ92738 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
USP6NLQ92738 AC092658.1-201ENST00000505836 891 ntBASIC18.52■□□□□ 0.56
USP6NLQ92738 NEU3-203ENST00000529024 581 ntTSL 3 BASIC18.52■□□□□ 0.56
USP6NLQ92738 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
USP6NLQ92738 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
USP6NLQ92738 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC18.52■□□□□ 0.56
USP6NLQ92738 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC18.52■□□□□ 0.56
USP6NLQ92738 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
USP6NLQ92738 TMEM261P1-201ENST00000604899 340 ntBASIC18.52■□□□□ 0.56
USP6NLQ92738 WFDC1-204ENST00000613603 549 ntBASIC18.52■□□□□ 0.56
USP6NLQ92738 MIR6069-201ENST00000620069 79 ntBASIC18.52■□□□□ 0.56
USP6NLQ92738 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
USP6NLQ92738 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
USP6NLQ92738 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
USP6NLQ92738 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC18.52■□□□□ 0.55
USP6NLQ92738 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
USP6NLQ92738 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.52■□□□□ 0.55
USP6NLQ92738 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
USP6NLQ92738 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
USP6NLQ92738 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
USP6NLQ92738 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
USP6NLQ92738 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
USP6NLQ92738 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
USP6NLQ92738 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
USP6NLQ92738 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
USP6NLQ92738 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
USP6NLQ92738 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
USP6NLQ92738 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
USP6NLQ92738 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.52■□□□□ 0.55
USP6NLQ92738 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC18.52■□□□□ 0.55
USP6NLQ92738 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
USP6NLQ92738 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
USP6NLQ92738 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
USP6NLQ92738 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC18.51■□□□□ 0.55
USP6NLQ92738 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
USP6NLQ92738 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
USP6NLQ92738 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
USP6NLQ92738 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
USP6NLQ92738 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC18.51■□□□□ 0.55
USP6NLQ92738 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
USP6NLQ92738 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
USP6NLQ92738 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
USP6NLQ92738 PCDHB17P-201ENST00000539533 2393 ntBASIC18.51■□□□□ 0.55
USP6NLQ92738 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
USP6NLQ92738 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC18.51■□□□□ 0.55
USP6NLQ92738 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC18.51■□□□□ 0.55
USP6NLQ92738 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms