Protein–RNA interactions for Protein: Q92570

NR4A3, Nuclear receptor subfamily 4 group A member 3, humanhuman

Predictions only

Length 626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A3Q92570 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NR4A3Q92570 AC004449.1-201ENST00000564240 433 ntBASIC15.55■□□□□ 0.08
NR4A3Q92570 AC092364.2-202ENST00000597012 1073 ntBASIC15.55■□□□□ 0.08
NR4A3Q92570 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
NR4A3Q92570 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC15.55■□□□□ 0.08
NR4A3Q92570 AC105339.1-204ENST00000636249 355 ntBASIC15.55■□□□□ 0.08
NR4A3Q92570 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
NR4A3Q92570 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
NR4A3Q92570 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.55■□□□□ 0.08
NR4A3Q92570 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
NR4A3Q92570 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC15.55■□□□□ 0.08
NR4A3Q92570 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NR4A3Q92570 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC15.55■□□□□ 0.08
NR4A3Q92570 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NR4A3Q92570 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
NR4A3Q92570 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15.54■□□□□ 0.08
NR4A3Q92570 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC15.54■□□□□ 0.08
NR4A3Q92570 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
NR4A3Q92570 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NR4A3Q92570 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.54■□□□□ 0.08
NR4A3Q92570 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
NR4A3Q92570 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NR4A3Q92570 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NR4A3Q92570 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NR4A3Q92570 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC15.54■□□□□ 0.08
NR4A3Q92570 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
NR4A3Q92570 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NR4A3Q92570 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NR4A3Q92570 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NR4A3Q92570 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NR4A3Q92570 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
NR4A3Q92570 AL139400.1-201ENST00000366220 510 ntBASIC15.54■□□□□ 0.08
NR4A3Q92570 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
NR4A3Q92570 AC004461.1-201ENST00000412461 403 ntBASIC15.54■□□□□ 0.08
NR4A3Q92570 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NR4A3Q92570 AL513480.1-201ENST00000451731 511 ntBASIC15.54■□□□□ 0.08
NR4A3Q92570 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC15.54■□□□□ 0.08
NR4A3Q92570 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC15.54■□□□□ 0.08
NR4A3Q92570 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC15.54■□□□□ 0.08
NR4A3Q92570 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC15.54■□□□□ 0.08
NR4A3Q92570 AC112191.1-201ENST00000523689 701 ntBASIC15.54■□□□□ 0.08
NR4A3Q92570 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC15.54■□□□□ 0.08
NR4A3Q92570 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
NR4A3Q92570 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC15.54■□□□□ 0.08
NR4A3Q92570 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
NR4A3Q92570 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
NR4A3Q92570 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC15.54■□□□□ 0.08
NR4A3Q92570 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NR4A3Q92570 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NR4A3Q92570 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NR4A3Q92570 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC15.54■□□□□ 0.08
NR4A3Q92570 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
NR4A3Q92570 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NR4A3Q92570 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.54■□□□□ 0.08
NR4A3Q92570 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
NR4A3Q92570 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC15.54■□□□□ 0.08
NR4A3Q92570 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NR4A3Q92570 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NR4A3Q92570 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
NR4A3Q92570 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC15.53■□□□□ 0.08
NR4A3Q92570 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NR4A3Q92570 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
NR4A3Q92570 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
NR4A3Q92570 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NR4A3Q92570 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC15.53■□□□□ 0.08
NR4A3Q92570 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
NR4A3Q92570 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC15.53■□□□□ 0.08
NR4A3Q92570 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC15.53■□□□□ 0.08
NR4A3Q92570 AL513477.1-201ENST00000602865 2407 ntBASIC15.53■□□□□ 0.08
NR4A3Q92570 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NR4A3Q92570 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
NR4A3Q92570 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NR4A3Q92570 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC15.53■□□□□ 0.08
NR4A3Q92570 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
NR4A3Q92570 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC15.53■□□□□ 0.08
NR4A3Q92570 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NR4A3Q92570 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NR4A3Q92570 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC15.53■□□□□ 0.08
NR4A3Q92570 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC15.53■□□□□ 0.08
NR4A3Q92570 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC15.53■□□□□ 0.08
NR4A3Q92570 LSM12-202ENST00000585388 942 ntTSL 3 BASIC15.53■□□□□ 0.08
NR4A3Q92570 ACTL9-202ENST00000612068 1252 ntBASIC15.53■□□□□ 0.08
NR4A3Q92570 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NR4A3Q92570 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
NR4A3Q92570 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC15.53■□□□□ 0.08
NR4A3Q92570 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
NR4A3Q92570 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
NR4A3Q92570 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NR4A3Q92570 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NR4A3Q92570 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
NR4A3Q92570 AC046158.3-201ENST00000624947 2558 ntBASIC15.53■□□□□ 0.08
NR4A3Q92570 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NR4A3Q92570 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC15.53■□□□□ 0.08
NR4A3Q92570 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NR4A3Q92570 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC15.53■□□□□ 0.08
NR4A3Q92570 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
NR4A3Q92570 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
NR4A3Q92570 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NR4A3Q92570 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
NR4A3Q92570 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms