Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.57□□□□□ -0.08
RAB40AQ8WXH6 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB40AQ8WXH6 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB40AQ8WXH6 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC14.57□□□□□ -0.08
RAB40AQ8WXH6 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RAB40AQ8WXH6 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC14.57□□□□□ -0.08
RAB40AQ8WXH6 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB40AQ8WXH6 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB40AQ8WXH6 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RAB40AQ8WXH6 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB40AQ8WXH6 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
RAB40AQ8WXH6 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RAB40AQ8WXH6 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB40AQ8WXH6 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB40AQ8WXH6 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB40AQ8WXH6 RPS2P28-201ENST00000314255 741 ntBASIC14.57□□□□□ -0.08
RAB40AQ8WXH6 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB40AQ8WXH6 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB40AQ8WXH6 AL031284.1-201ENST00000419297 478 ntBASIC14.57□□□□□ -0.08
RAB40AQ8WXH6 AC093909.1-201ENST00000504731 1122 ntBASIC14.57□□□□□ -0.08
RAB40AQ8WXH6 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC14.57□□□□□ -0.08
RAB40AQ8WXH6 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC14.57□□□□□ -0.08
RAB40AQ8WXH6 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC14.57□□□□□ -0.08
RAB40AQ8WXH6 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC14.57□□□□□ -0.08
RAB40AQ8WXH6 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC14.57□□□□□ -0.08
RAB40AQ8WXH6 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB40AQ8WXH6 AL139288.1-201ENST00000623748 933 ntBASIC14.57□□□□□ -0.08
RAB40AQ8WXH6 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
RAB40AQ8WXH6 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB40AQ8WXH6 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RAB40AQ8WXH6 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB40AQ8WXH6 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB40AQ8WXH6 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC14.57□□□□□ -0.08
RAB40AQ8WXH6 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB40AQ8WXH6 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RAB40AQ8WXH6 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RAB40AQ8WXH6 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC14.57□□□□□ -0.08
RAB40AQ8WXH6 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
RAB40AQ8WXH6 BID-213ENST00000615414 2236 ntTSL 5 BASIC14.57□□□□□ -0.08
RAB40AQ8WXH6 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
RAB40AQ8WXH6 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB40AQ8WXH6 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB40AQ8WXH6 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
RAB40AQ8WXH6 AC092850.2-201ENST00000623821 2697 ntBASIC14.57□□□□□ -0.08
RAB40AQ8WXH6 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
RAB40AQ8WXH6 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
RAB40AQ8WXH6 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RAB40AQ8WXH6 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC14.56□□□□□ -0.08
RAB40AQ8WXH6 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
RAB40AQ8WXH6 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.56□□□□□ -0.08
RAB40AQ8WXH6 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
RAB40AQ8WXH6 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RAB40AQ8WXH6 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAB40AQ8WXH6 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAB40AQ8WXH6 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAB40AQ8WXH6 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC14.56□□□□□ -0.08
RAB40AQ8WXH6 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
RAB40AQ8WXH6 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAB40AQ8WXH6 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC14.56□□□□□ -0.08
RAB40AQ8WXH6 AC003669.1-201ENST00000334569 611 ntBASIC14.56□□□□□ -0.08
RAB40AQ8WXH6 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
RAB40AQ8WXH6 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC14.56□□□□□ -0.08
RAB40AQ8WXH6 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAB40AQ8WXH6 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC14.56□□□□□ -0.08
RAB40AQ8WXH6 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC14.56□□□□□ -0.08
RAB40AQ8WXH6 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RAB40AQ8WXH6 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC14.56□□□□□ -0.08
RAB40AQ8WXH6 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
RAB40AQ8WXH6 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC14.56□□□□□ -0.08
RAB40AQ8WXH6 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAB40AQ8WXH6 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAB40AQ8WXH6 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RAB40AQ8WXH6 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAB40AQ8WXH6 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
RAB40AQ8WXH6 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAB40AQ8WXH6 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
RAB40AQ8WXH6 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.56□□□□□ -0.08
RAB40AQ8WXH6 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RAB40AQ8WXH6 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC14.56□□□□□ -0.08
RAB40AQ8WXH6 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAB40AQ8WXH6 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RAB40AQ8WXH6 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAB40AQ8WXH6 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RAB40AQ8WXH6 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC14.56□□□□□ -0.08
RAB40AQ8WXH6 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAB40AQ8WXH6 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
RAB40AQ8WXH6 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.56□□□□□ -0.08
RAB40AQ8WXH6 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC14.56□□□□□ -0.08
RAB40AQ8WXH6 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAB40AQ8WXH6 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAB40AQ8WXH6 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
RAB40AQ8WXH6 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RAB40AQ8WXH6 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
RAB40AQ8WXH6 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RAB40AQ8WXH6 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC14.55□□□□□ -0.08
RAB40AQ8WXH6 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RAB40AQ8WXH6 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.55□□□□□ -0.08
RAB40AQ8WXH6 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
RAB40AQ8WXH6 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RAB40AQ8WXH6 PC-204ENST00000524491 1714 ntTSL 2 BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms