Protein–RNA interactions for Protein: Q8WVD3

RNF138, E3 ubiquitin-protein ligase RNF138, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138Q8WVD3 AL691432.1-201ENST00000596308 1422 ntBASIC14.78□□□□□ -0.04
RNF138Q8WVD3 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
RNF138Q8WVD3 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
RNF138Q8WVD3 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RNF138Q8WVD3 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
RNF138Q8WVD3 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC14.78□□□□□ -0.04
RNF138Q8WVD3 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RNF138Q8WVD3 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RNF138Q8WVD3 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
RNF138Q8WVD3 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RNF138Q8WVD3 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
RNF138Q8WVD3 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RNF138Q8WVD3 HNRNPFP1-201ENST00000391730 1133 ntBASIC14.78□□□□□ -0.04
RNF138Q8WVD3 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
RNF138Q8WVD3 RBM39-205ENST00000397370 612 ntTSL 2 BASIC14.78□□□□□ -0.04
RNF138Q8WVD3 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.78□□□□□ -0.04
RNF138Q8WVD3 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC14.78□□□□□ -0.04
RNF138Q8WVD3 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
RNF138Q8WVD3 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RNF138Q8WVD3 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC14.78□□□□□ -0.04
RNF138Q8WVD3 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC14.78□□□□□ -0.04
RNF138Q8WVD3 RFPL4AP1-201ENST00000530883 850 ntBASIC14.78□□□□□ -0.04
RNF138Q8WVD3 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC14.78□□□□□ -0.04
RNF138Q8WVD3 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC14.78□□□□□ -0.04
RNF138Q8WVD3 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC14.78□□□□□ -0.04
RNF138Q8WVD3 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RNF138Q8WVD3 GPER1-207ENST00000619052 571 ntTSL 2 BASIC14.78□□□□□ -0.04
RNF138Q8WVD3 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
RNF138Q8WVD3 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
RNF138Q8WVD3 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC14.78□□□□□ -0.04
RNF138Q8WVD3 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RNF138Q8WVD3 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.78□□□□□ -0.04
RNF138Q8WVD3 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
RNF138Q8WVD3 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC14.78□□□□□ -0.04
RNF138Q8WVD3 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RNF138Q8WVD3 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC14.78□□□□□ -0.04
RNF138Q8WVD3 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.78□□□□□ -0.04
RNF138Q8WVD3 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RNF138Q8WVD3 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
RNF138Q8WVD3 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RNF138Q8WVD3 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RNF138Q8WVD3 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
RNF138Q8WVD3 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RNF138Q8WVD3 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
RNF138Q8WVD3 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC14.77□□□□□ -0.04
RNF138Q8WVD3 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
RNF138Q8WVD3 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC14.77□□□□□ -0.04
RNF138Q8WVD3 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
RNF138Q8WVD3 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
RNF138Q8WVD3 AP001282.1-201ENST00000531301 1499 ntBASIC14.77□□□□□ -0.04
RNF138Q8WVD3 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RNF138Q8WVD3 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
RNF138Q8WVD3 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC14.77□□□□□ -0.04
RNF138Q8WVD3 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
RNF138Q8WVD3 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
RNF138Q8WVD3 AC099398.1-201ENST00000567919 2776 ntBASIC14.77□□□□□ -0.04
RNF138Q8WVD3 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
RNF138Q8WVD3 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC14.77□□□□□ -0.04
RNF138Q8WVD3 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
RNF138Q8WVD3 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RNF138Q8WVD3 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
RNF138Q8WVD3 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
RNF138Q8WVD3 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RNF138Q8WVD3 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.77□□□□□ -0.04
RNF138Q8WVD3 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RNF138Q8WVD3 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
RNF138Q8WVD3 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RNF138Q8WVD3 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
RNF138Q8WVD3 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RNF138Q8WVD3 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
RNF138Q8WVD3 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
RNF138Q8WVD3 HAUS4P1-201ENST00000406739 1145 ntBASIC14.77□□□□□ -0.05
RNF138Q8WVD3 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
RNF138Q8WVD3 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC14.77□□□□□ -0.05
RNF138Q8WVD3 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC14.77□□□□□ -0.05
RNF138Q8WVD3 KLF2P3-201ENST00000451977 1087 ntBASIC14.77□□□□□ -0.05
RNF138Q8WVD3 AL139010.1-201ENST00000454878 894 ntBASIC14.77□□□□□ -0.05
RNF138Q8WVD3 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC14.77□□□□□ -0.05
RNF138Q8WVD3 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RNF138Q8WVD3 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.77□□□□□ -0.05
RNF138Q8WVD3 AC140878.1-201ENST00000565277 250 ntBASIC14.77□□□□□ -0.05
RNF138Q8WVD3 RN7SL828P-201ENST00000607615 303 ntBASIC14.77□□□□□ -0.05
RNF138Q8WVD3 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
RNF138Q8WVD3 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
RNF138Q8WVD3 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.77□□□□□ -0.05
RNF138Q8WVD3 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
RNF138Q8WVD3 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
RNF138Q8WVD3 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
RNF138Q8WVD3 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
RNF138Q8WVD3 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
RNF138Q8WVD3 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC14.77□□□□□ -0.05
RNF138Q8WVD3 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RNF138Q8WVD3 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
RNF138Q8WVD3 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC14.77□□□□□ -0.05
RNF138Q8WVD3 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RNF138Q8WVD3 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
RNF138Q8WVD3 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RNF138Q8WVD3 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RNF138Q8WVD3 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RNF138Q8WVD3 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms