Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC19.77■□□□□ 0.76
SNED1Q8TER0 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC19.77■□□□□ 0.76
SNED1Q8TER0 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC19.77■□□□□ 0.76
SNED1Q8TER0 PFAS-212ENST00000625942 396 ntTSL 5 BASIC19.77■□□□□ 0.76
SNED1Q8TER0 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SNED1Q8TER0 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SNED1Q8TER0 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SNED1Q8TER0 AMT-232ENST00000636199 1546 ntTSL 5 BASIC19.77■□□□□ 0.76
SNED1Q8TER0 KRT8P44-201ENST00000441609 1350 ntBASIC19.77■□□□□ 0.76
SNED1Q8TER0 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC19.77■□□□□ 0.76
SNED1Q8TER0 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SNED1Q8TER0 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
SNED1Q8TER0 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC19.77■□□□□ 0.76
SNED1Q8TER0 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SNED1Q8TER0 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
SNED1Q8TER0 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
SNED1Q8TER0 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
SNED1Q8TER0 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
SNED1Q8TER0 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SNED1Q8TER0 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
SNED1Q8TER0 AC074338.1-201ENST00000416825 156 ntBASIC19.76■□□□□ 0.75
SNED1Q8TER0 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC19.76■□□□□ 0.75
SNED1Q8TER0 AL355994.2-201ENST00000447882 704 ntBASIC19.76■□□□□ 0.75
SNED1Q8TER0 CTBP2P5-201ENST00000454986 1264 ntBASIC19.76■□□□□ 0.75
SNED1Q8TER0 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SNED1Q8TER0 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC19.76■□□□□ 0.75
SNED1Q8TER0 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
SNED1Q8TER0 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC19.76■□□□□ 0.75
SNED1Q8TER0 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SNED1Q8TER0 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC19.76■□□□□ 0.75
SNED1Q8TER0 BRI3BPP1-201ENST00000594224 787 ntBASIC19.76■□□□□ 0.75
SNED1Q8TER0 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
SNED1Q8TER0 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SNED1Q8TER0 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC19.76■□□□□ 0.75
SNED1Q8TER0 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
SNED1Q8TER0 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SNED1Q8TER0 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
SNED1Q8TER0 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
SNED1Q8TER0 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
SNED1Q8TER0 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC19.76■□□□□ 0.75
SNED1Q8TER0 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC19.76■□□□□ 0.75
SNED1Q8TER0 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
SNED1Q8TER0 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SNED1Q8TER0 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SNED1Q8TER0 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
SNED1Q8TER0 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC19.76■□□□□ 0.75
SNED1Q8TER0 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
SNED1Q8TER0 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SNED1Q8TER0 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
SNED1Q8TER0 USB1-202ENST00000423271 1217 ntTSL 2 BASIC19.76■□□□□ 0.75
SNED1Q8TER0 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC19.76■□□□□ 0.75
SNED1Q8TER0 RN7SL399P-201ENST00000471648 279 ntBASIC19.76■□□□□ 0.75
SNED1Q8TER0 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SNED1Q8TER0 CD74-212ENST00000524315 584 ntTSL 5 BASIC19.76■□□□□ 0.75
SNED1Q8TER0 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC19.76■□□□□ 0.75
SNED1Q8TER0 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC19.76■□□□□ 0.75
SNED1Q8TER0 MIR4321-201ENST00000592276 80 ntBASIC19.76■□□□□ 0.75
SNED1Q8TER0 GPR182-203ENST00000622922 591 ntBASIC19.76■□□□□ 0.75
SNED1Q8TER0 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SNED1Q8TER0 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SNED1Q8TER0 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC19.75■□□□□ 0.75
SNED1Q8TER0 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
SNED1Q8TER0 HNRNPA1P48-201ENST00000562726 1377 ntBASIC19.75■□□□□ 0.75
SNED1Q8TER0 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SNED1Q8TER0 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SNED1Q8TER0 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SNED1Q8TER0 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SNED1Q8TER0 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SNED1Q8TER0 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SNED1Q8TER0 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SNED1Q8TER0 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SNED1Q8TER0 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
SNED1Q8TER0 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SNED1Q8TER0 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
SNED1Q8TER0 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC19.75■□□□□ 0.75
SNED1Q8TER0 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SNED1Q8TER0 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SNED1Q8TER0 KRT43P-201ENST00000434019 910 ntBASIC19.75■□□□□ 0.75
SNED1Q8TER0 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
SNED1Q8TER0 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC19.75■□□□□ 0.75
SNED1Q8TER0 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SNED1Q8TER0 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SNED1Q8TER0 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SNED1Q8TER0 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
SNED1Q8TER0 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC19.74■□□□□ 0.75
SNED1Q8TER0 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC19.74■□□□□ 0.75
SNED1Q8TER0 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
SNED1Q8TER0 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SNED1Q8TER0 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SNED1Q8TER0 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SNED1Q8TER0 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SNED1Q8TER0 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC19.74■□□□□ 0.75
SNED1Q8TER0 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC19.74■□□□□ 0.75
SNED1Q8TER0 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC19.74■□□□□ 0.75
SNED1Q8TER0 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
SNED1Q8TER0 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SNED1Q8TER0 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC19.74■□□□□ 0.75
SNED1Q8TER0 AC092933.1-201ENST00000393644 945 ntBASIC19.74■□□□□ 0.75
SNED1Q8TER0 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SNED1Q8TER0 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms