Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 AC013467.2-201ENST00000605472 835 ntBASIC10.76□□□□□ -0.69
SMIM11BQ8TCY0 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC10.76□□□□□ -0.69
SMIM11BQ8TCY0 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
SMIM11BQ8TCY0 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
SMIM11BQ8TCY0 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
SMIM11BQ8TCY0 AC104581.4-201ENST00000623126 3052 ntBASIC10.76□□□□□ -0.69
SMIM11BQ8TCY0 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
SMIM11BQ8TCY0 AL671710.1-201ENST00000610245 2349 ntBASIC10.76□□□□□ -0.69
SMIM11BQ8TCY0 AL359258.3-201ENST00000622910 2331 ntBASIC10.76□□□□□ -0.69
SMIM11BQ8TCY0 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC10.76□□□□□ -0.69
SMIM11BQ8TCY0 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC10.76□□□□□ -0.69
SMIM11BQ8TCY0 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
SMIM11BQ8TCY0 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
SMIM11BQ8TCY0 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
SMIM11BQ8TCY0 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
SMIM11BQ8TCY0 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
SMIM11BQ8TCY0 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
SMIM11BQ8TCY0 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
SMIM11BQ8TCY0 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
SMIM11BQ8TCY0 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
SMIM11BQ8TCY0 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC10.76□□□□□ -0.69
SMIM11BQ8TCY0 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC10.76□□□□□ -0.69
SMIM11BQ8TCY0 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC10.76□□□□□ -0.69
SMIM11BQ8TCY0 AL353692.3-201ENST00000407031 1396 ntBASIC10.76□□□□□ -0.69
SMIM11BQ8TCY0 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC10.76□□□□□ -0.69
SMIM11BQ8TCY0 DKFZP434H168-201ENST00000567381 1905 ntBASIC10.76□□□□□ -0.69
SMIM11BQ8TCY0 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC10.76□□□□□ -0.69
SMIM11BQ8TCY0 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
SMIM11BQ8TCY0 AC005089.1-201ENST00000619486 2241 ntBASIC10.76□□□□□ -0.69
SMIM11BQ8TCY0 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
SMIM11BQ8TCY0 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC10.75□□□□□ -0.69
SMIM11BQ8TCY0 AC139749.1-202ENST00000617529 3139 ntBASIC10.75□□□□□ -0.69
SMIM11BQ8TCY0 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
SMIM11BQ8TCY0 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
SMIM11BQ8TCY0 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
SMIM11BQ8TCY0 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
SMIM11BQ8TCY0 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
SMIM11BQ8TCY0 TMBIM7P-203ENST00000641617 1718 ntBASIC10.75□□□□□ -0.69
SMIM11BQ8TCY0 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
SMIM11BQ8TCY0 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
SMIM11BQ8TCY0 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
SMIM11BQ8TCY0 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
SMIM11BQ8TCY0 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
SMIM11BQ8TCY0 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
SMIM11BQ8TCY0 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC10.75□□□□□ -0.69
SMIM11BQ8TCY0 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC10.75□□□□□ -0.69
SMIM11BQ8TCY0 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
SMIM11BQ8TCY0 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
SMIM11BQ8TCY0 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC10.75□□□□□ -0.69
SMIM11BQ8TCY0 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
SMIM11BQ8TCY0 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
SMIM11BQ8TCY0 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
SMIM11BQ8TCY0 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC10.75□□□□□ -0.69
SMIM11BQ8TCY0 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC10.75□□□□□ -0.69
SMIM11BQ8TCY0 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC10.75□□□□□ -0.69
SMIM11BQ8TCY0 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
SMIM11BQ8TCY0 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
SMIM11BQ8TCY0 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
SMIM11BQ8TCY0 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
SMIM11BQ8TCY0 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
SMIM11BQ8TCY0 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC10.75□□□□□ -0.69
SMIM11BQ8TCY0 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC10.75□□□□□ -0.69
SMIM11BQ8TCY0 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC10.75□□□□□ -0.69
SMIM11BQ8TCY0 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC10.75□□□□□ -0.69
SMIM11BQ8TCY0 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
SMIM11BQ8TCY0 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC10.75□□□□□ -0.69
SMIM11BQ8TCY0 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC10.75□□□□□ -0.69
SMIM11BQ8TCY0 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
SMIM11BQ8TCY0 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC10.75□□□□□ -0.69
SMIM11BQ8TCY0 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC10.75□□□□□ -0.69
SMIM11BQ8TCY0 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC10.75□□□□□ -0.69
SMIM11BQ8TCY0 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
SMIM11BQ8TCY0 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
SMIM11BQ8TCY0 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
SMIM11BQ8TCY0 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
SMIM11BQ8TCY0 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
SMIM11BQ8TCY0 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC10.75□□□□□ -0.69
SMIM11BQ8TCY0 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
SMIM11BQ8TCY0 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
SMIM11BQ8TCY0 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
SMIM11BQ8TCY0 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
SMIM11BQ8TCY0 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
SMIM11BQ8TCY0 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC10.75□□□□□ -0.69
SMIM11BQ8TCY0 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
SMIM11BQ8TCY0 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
SMIM11BQ8TCY0 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
SMIM11BQ8TCY0 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC10.75□□□□□ -0.69
SMIM11BQ8TCY0 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
SMIM11BQ8TCY0 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC10.75□□□□□ -0.69
SMIM11BQ8TCY0 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
SMIM11BQ8TCY0 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
SMIM11BQ8TCY0 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
SMIM11BQ8TCY0 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC10.74□□□□□ -0.69
SMIM11BQ8TCY0 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC10.74□□□□□ -0.69
SMIM11BQ8TCY0 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
SMIM11BQ8TCY0 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC10.74□□□□□ -0.69
SMIM11BQ8TCY0 AC020658.6-201ENST00000623564 1870 ntBASIC10.74□□□□□ -0.69
SMIM11BQ8TCY0 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
SMIM11BQ8TCY0 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC10.74□□□□□ -0.69
SMIM11BQ8TCY0 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms