Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 SKP2-204ENST00000508514 821 ntTSL 3 BASIC17.5■□□□□ 0.39
CCDC50Q8IVM0 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.5■□□□□ 0.39
CCDC50Q8IVM0 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
CCDC50Q8IVM0 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17.5■□□□□ 0.39
CCDC50Q8IVM0 AF228730.7-201ENST00000641842 219 ntBASIC17.5■□□□□ 0.39
CCDC50Q8IVM0 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC17.5■□□□□ 0.39
CCDC50Q8IVM0 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC17.5■□□□□ 0.39
CCDC50Q8IVM0 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC17.5■□□□□ 0.39
CCDC50Q8IVM0 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.5■□□□□ 0.39
CCDC50Q8IVM0 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC50Q8IVM0 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.5■□□□□ 0.39
CCDC50Q8IVM0 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC50Q8IVM0 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC50Q8IVM0 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CCDC50Q8IVM0 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC50Q8IVM0 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC50Q8IVM0 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC50Q8IVM0 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CCDC50Q8IVM0 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.49■□□□□ 0.39
CCDC50Q8IVM0 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.49■□□□□ 0.39
CCDC50Q8IVM0 AC006504.4-201ENST00000592118 1568 ntBASIC17.49■□□□□ 0.39
CCDC50Q8IVM0 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CCDC50Q8IVM0 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC17.49■□□□□ 0.39
CCDC50Q8IVM0 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC17.49■□□□□ 0.39
CCDC50Q8IVM0 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CCDC50Q8IVM0 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC50Q8IVM0 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
CCDC50Q8IVM0 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC50Q8IVM0 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC50Q8IVM0 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC50Q8IVM0 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC50Q8IVM0 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
CCDC50Q8IVM0 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC50Q8IVM0 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC50Q8IVM0 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC50Q8IVM0 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC50Q8IVM0 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC50Q8IVM0 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC50Q8IVM0 AKR1C7P-201ENST00000305623 895 ntBASIC17.49■□□□□ 0.39
CCDC50Q8IVM0 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC50Q8IVM0 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC17.49■□□□□ 0.39
CCDC50Q8IVM0 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.49■□□□□ 0.39
CCDC50Q8IVM0 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.49■□□□□ 0.39
CCDC50Q8IVM0 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.49■□□□□ 0.39
CCDC50Q8IVM0 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC50Q8IVM0 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC17.49■□□□□ 0.39
CCDC50Q8IVM0 MPDU1-223ENST00000582151 728 ntBASIC17.49■□□□□ 0.39
CCDC50Q8IVM0 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.49■□□□□ 0.39
CCDC50Q8IVM0 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC50Q8IVM0 AC025062.2-201ENST00000605477 670 ntBASIC17.49■□□□□ 0.39
CCDC50Q8IVM0 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC17.49■□□□□ 0.39
CCDC50Q8IVM0 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC50Q8IVM0 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC50Q8IVM0 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC50Q8IVM0 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC50Q8IVM0 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC17.49■□□□□ 0.39
CCDC50Q8IVM0 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC50Q8IVM0 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC50Q8IVM0 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CCDC50Q8IVM0 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC50Q8IVM0 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC50Q8IVM0 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC50Q8IVM0 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC50Q8IVM0 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC50Q8IVM0 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC17.48■□□□□ 0.39
CCDC50Q8IVM0 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC50Q8IVM0 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CCDC50Q8IVM0 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC50Q8IVM0 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC50Q8IVM0 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC50Q8IVM0 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC50Q8IVM0 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC50Q8IVM0 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC50Q8IVM0 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC50Q8IVM0 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC50Q8IVM0 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CCDC50Q8IVM0 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
CCDC50Q8IVM0 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CCDC50Q8IVM0 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC50Q8IVM0 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC17.48■□□□□ 0.39
CCDC50Q8IVM0 AC021087.4-201ENST00000563761 564 ntBASIC17.48■□□□□ 0.39
CCDC50Q8IVM0 AC006557.2-201ENST00000592985 1240 ntBASIC17.48■□□□□ 0.39
CCDC50Q8IVM0 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.48■□□□□ 0.39
CCDC50Q8IVM0 AC012313.10-201ENST00000623509 926 ntBASIC17.48■□□□□ 0.39
CCDC50Q8IVM0 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.48■□□□□ 0.39
CCDC50Q8IVM0 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC50Q8IVM0 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC50Q8IVM0 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC50Q8IVM0 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CCDC50Q8IVM0 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.48■□□□□ 0.39
CCDC50Q8IVM0 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC50Q8IVM0 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC17.48■□□□□ 0.39
CCDC50Q8IVM0 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC17.48■□□□□ 0.39
CCDC50Q8IVM0 GGT3P-204ENST00000453783 1664 ntBASIC17.48■□□□□ 0.39
CCDC50Q8IVM0 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC50Q8IVM0 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC50Q8IVM0 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC50Q8IVM0 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.47■□□□□ 0.39
CCDC50Q8IVM0 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC50Q8IVM0 AC131009.4-201ENST00000624048 1740 ntBASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms