Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
CROCCP3Q8IVE0 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
CROCCP3Q8IVE0 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC15□□□□□ -0.01
CROCCP3Q8IVE0 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CROCCP3Q8IVE0 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CROCCP3Q8IVE0 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CROCCP3Q8IVE0 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CROCCP3Q8IVE0 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC15□□□□□ -0.01
CROCCP3Q8IVE0 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC15□□□□□ -0.01
CROCCP3Q8IVE0 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC15□□□□□ -0.01
CROCCP3Q8IVE0 AC097374.2-201ENST00000618617 1306 ntBASIC15□□□□□ -0.01
CROCCP3Q8IVE0 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CROCCP3Q8IVE0 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
CROCCP3Q8IVE0 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
CROCCP3Q8IVE0 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CROCCP3Q8IVE0 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC15□□□□□ -0.01
CROCCP3Q8IVE0 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CROCCP3Q8IVE0 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
CROCCP3Q8IVE0 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CROCCP3Q8IVE0 APTR-205ENST00000447009 902 ntTSL 2 BASIC15□□□□□ -0.01
CROCCP3Q8IVE0 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC15□□□□□ -0.01
CROCCP3Q8IVE0 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC15□□□□□ -0.01
CROCCP3Q8IVE0 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
CROCCP3Q8IVE0 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC15□□□□□ -0.01
CROCCP3Q8IVE0 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC15□□□□□ -0.01
CROCCP3Q8IVE0 FAM197Y4-202ENST00000622692 608 ntBASIC15□□□□□ -0.01
CROCCP3Q8IVE0 ANKRD20A8P-203ENST00000641373 517 ntBASIC15□□□□□ -0.01
CROCCP3Q8IVE0 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
CROCCP3Q8IVE0 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CROCCP3Q8IVE0 TBC1D3P5-201ENST00000579401 1545 ntBASIC15□□□□□ -0.01
CROCCP3Q8IVE0 OS9-204ENST00000389146 2091 ntTSL 2 BASIC15□□□□□ -0.01
CROCCP3Q8IVE0 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
CROCCP3Q8IVE0 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CROCCP3Q8IVE0 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CROCCP3Q8IVE0 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC15□□□□□ -0.01
CROCCP3Q8IVE0 CICP20-201ENST00000443330 2801 ntBASIC15□□□□□ -0.01
CROCCP3Q8IVE0 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CROCCP3Q8IVE0 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CROCCP3Q8IVE0 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
CROCCP3Q8IVE0 CDC14C-201ENST00000428251 1719 ntBASIC15□□□□□ -0.01
CROCCP3Q8IVE0 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CROCCP3Q8IVE0 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC15□□□□□ -0.01
CROCCP3Q8IVE0 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CROCCP3Q8IVE0 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CROCCP3Q8IVE0 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC15□□□□□ -0.01
CROCCP3Q8IVE0 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CROCCP3Q8IVE0 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CROCCP3Q8IVE0 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
CROCCP3Q8IVE0 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CROCCP3Q8IVE0 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC15□□□□□ -0.01
CROCCP3Q8IVE0 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC15□□□□□ -0.01
CROCCP3Q8IVE0 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CROCCP3Q8IVE0 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CROCCP3Q8IVE0 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC14.99□□□□□ -0.01
CROCCP3Q8IVE0 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CROCCP3Q8IVE0 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.99□□□□□ -0.01
CROCCP3Q8IVE0 LINC02447-202ENST00000501888 2146 ntBASIC14.99□□□□□ -0.01
CROCCP3Q8IVE0 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
CROCCP3Q8IVE0 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC14.99□□□□□ -0.01
CROCCP3Q8IVE0 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
CROCCP3Q8IVE0 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC14.99□□□□□ -0.01
CROCCP3Q8IVE0 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CROCCP3Q8IVE0 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
CROCCP3Q8IVE0 AC013726.1-201ENST00000563747 2285 ntBASIC14.99□□□□□ -0.01
CROCCP3Q8IVE0 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CROCCP3Q8IVE0 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
CROCCP3Q8IVE0 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
CROCCP3Q8IVE0 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.99□□□□□ -0.01
CROCCP3Q8IVE0 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
CROCCP3Q8IVE0 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CROCCP3Q8IVE0 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC14.99□□□□□ -0.01
CROCCP3Q8IVE0 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CROCCP3Q8IVE0 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
CROCCP3Q8IVE0 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
CROCCP3Q8IVE0 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC14.99□□□□□ -0.01
CROCCP3Q8IVE0 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC14.99□□□□□ -0.01
CROCCP3Q8IVE0 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC14.99□□□□□ -0.01
CROCCP3Q8IVE0 AC128676.1-201ENST00000454392 318 ntBASIC14.99□□□□□ -0.01
CROCCP3Q8IVE0 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
CROCCP3Q8IVE0 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC14.99□□□□□ -0.01
CROCCP3Q8IVE0 TK1-205ENST00000590862 642 ntTSL 3 BASIC14.99□□□□□ -0.01
CROCCP3Q8IVE0 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC14.99□□□□□ -0.01
CROCCP3Q8IVE0 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CROCCP3Q8IVE0 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CROCCP3Q8IVE0 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CROCCP3Q8IVE0 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CROCCP3Q8IVE0 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CROCCP3Q8IVE0 CNTNAP3P2-201ENST00000617175 3861 ntBASIC14.99□□□□□ -0.01
CROCCP3Q8IVE0 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CROCCP3Q8IVE0 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CROCCP3Q8IVE0 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CROCCP3Q8IVE0 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC14.99□□□□□ -0.01
CROCCP3Q8IVE0 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CROCCP3Q8IVE0 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC14.99□□□□□ -0.01
CROCCP3Q8IVE0 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CROCCP3Q8IVE0 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CROCCP3Q8IVE0 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CROCCP3Q8IVE0 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CROCCP3Q8IVE0 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CROCCP3Q8IVE0 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms