Protein–RNA interactions for Protein: Q8IV77

CNGA4, Cyclic nucleotide-gated cation channel alpha-4, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA4Q8IV77 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CNGA4Q8IV77 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC17.96■□□□□ 0.47
CNGA4Q8IV77 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CNGA4Q8IV77 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CNGA4Q8IV77 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.96■□□□□ 0.47
CNGA4Q8IV77 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CNGA4Q8IV77 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CNGA4Q8IV77 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC17.96■□□□□ 0.47
CNGA4Q8IV77 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CNGA4Q8IV77 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CNGA4Q8IV77 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CNGA4Q8IV77 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC17.96■□□□□ 0.47
CNGA4Q8IV77 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC17.96■□□□□ 0.47
CNGA4Q8IV77 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CNGA4Q8IV77 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CNGA4Q8IV77 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CNGA4Q8IV77 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CNGA4Q8IV77 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CNGA4Q8IV77 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CNGA4Q8IV77 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.96■□□□□ 0.47
CNGA4Q8IV77 ISCU-203ENST00000431221 799 ntTSL 2 BASIC17.96■□□□□ 0.47
CNGA4Q8IV77 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.96■□□□□ 0.47
CNGA4Q8IV77 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.96■□□□□ 0.47
CNGA4Q8IV77 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CNGA4Q8IV77 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC17.96■□□□□ 0.47
CNGA4Q8IV77 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.96■□□□□ 0.47
CNGA4Q8IV77 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC17.96■□□□□ 0.47
CNGA4Q8IV77 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CNGA4Q8IV77 AC004706.3-202ENST00000621574 984 ntBASIC17.96■□□□□ 0.47
CNGA4Q8IV77 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC17.96■□□□□ 0.47
CNGA4Q8IV77 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CNGA4Q8IV77 SLC9A7P1-201ENST00000554295 3311 ntBASIC17.96■□□□□ 0.47
CNGA4Q8IV77 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC17.96■□□□□ 0.47
CNGA4Q8IV77 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CNGA4Q8IV77 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CNGA4Q8IV77 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CNGA4Q8IV77 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC17.96■□□□□ 0.47
CNGA4Q8IV77 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC17.96■□□□□ 0.46
CNGA4Q8IV77 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC17.96■□□□□ 0.46
CNGA4Q8IV77 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
CNGA4Q8IV77 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC17.96■□□□□ 0.46
CNGA4Q8IV77 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CNGA4Q8IV77 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CNGA4Q8IV77 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CNGA4Q8IV77 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CNGA4Q8IV77 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CNGA4Q8IV77 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CNGA4Q8IV77 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CNGA4Q8IV77 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CNGA4Q8IV77 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC17.95■□□□□ 0.46
CNGA4Q8IV77 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC17.95■□□□□ 0.46
CNGA4Q8IV77 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
CNGA4Q8IV77 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
CNGA4Q8IV77 PRAL-201ENST00000624952 3286 ntBASIC17.95■□□□□ 0.46
CNGA4Q8IV77 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
CNGA4Q8IV77 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.95■□□□□ 0.46
CNGA4Q8IV77 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CNGA4Q8IV77 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CNGA4Q8IV77 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CNGA4Q8IV77 PTCHD3P3-201ENST00000403073 906 ntBASIC17.95■□□□□ 0.46
CNGA4Q8IV77 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.95■□□□□ 0.46
CNGA4Q8IV77 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.95■□□□□ 0.46
CNGA4Q8IV77 SLC25A6P2-201ENST00000497974 877 ntBASIC17.95■□□□□ 0.46
CNGA4Q8IV77 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC17.95■□□□□ 0.46
CNGA4Q8IV77 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.95■□□□□ 0.46
CNGA4Q8IV77 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.95■□□□□ 0.46
CNGA4Q8IV77 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CNGA4Q8IV77 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
CNGA4Q8IV77 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.95■□□□□ 0.46
CNGA4Q8IV77 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CNGA4Q8IV77 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CNGA4Q8IV77 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CNGA4Q8IV77 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CNGA4Q8IV77 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CNGA4Q8IV77 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.95■□□□□ 0.46
CNGA4Q8IV77 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
CNGA4Q8IV77 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CNGA4Q8IV77 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC17.94■□□□□ 0.46
CNGA4Q8IV77 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CNGA4Q8IV77 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CNGA4Q8IV77 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CNGA4Q8IV77 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.94■□□□□ 0.46
CNGA4Q8IV77 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.94■□□□□ 0.46
CNGA4Q8IV77 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC17.94■□□□□ 0.46
CNGA4Q8IV77 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
CNGA4Q8IV77 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CNGA4Q8IV77 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CNGA4Q8IV77 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
CNGA4Q8IV77 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
CNGA4Q8IV77 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CNGA4Q8IV77 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CNGA4Q8IV77 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
CNGA4Q8IV77 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CNGA4Q8IV77 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.94■□□□□ 0.46
CNGA4Q8IV77 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
CNGA4Q8IV77 AC023824.1-201ENST00000562945 2975 ntBASIC17.94■□□□□ 0.46
CNGA4Q8IV77 AL049597.2-201ENST00000565575 961 ntBASIC17.94■□□□□ 0.46
CNGA4Q8IV77 PGM5P2-202ENST00000637225 1043 ntBASIC17.94■□□□□ 0.46
CNGA4Q8IV77 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.94■□□□□ 0.46
CNGA4Q8IV77 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms