Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC13.77□□□□□ -0.21
ZNF546Q86UE3 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC13.77□□□□□ -0.21
ZNF546Q86UE3 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
ZNF546Q86UE3 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ZNF546Q86UE3 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC13.77□□□□□ -0.21
ZNF546Q86UE3 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC13.77□□□□□ -0.21
ZNF546Q86UE3 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC13.77□□□□□ -0.21
ZNF546Q86UE3 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
ZNF546Q86UE3 AC019129.2-201ENST00000609837 1235 ntBASIC13.77□□□□□ -0.21
ZNF546Q86UE3 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
ZNF546Q86UE3 MME-217ENST00000616757 1315 ntTSL 5 BASIC13.77□□□□□ -0.21
ZNF546Q86UE3 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC13.77□□□□□ -0.21
ZNF546Q86UE3 FUT8-AS1-201ENST00000621019 1521 ntBASIC13.77□□□□□ -0.21
ZNF546Q86UE3 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ZNF546Q86UE3 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC13.77□□□□□ -0.21
ZNF546Q86UE3 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
ZNF546Q86UE3 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
ZNF546Q86UE3 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC13.77□□□□□ -0.21
ZNF546Q86UE3 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
ZNF546Q86UE3 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC13.77□□□□□ -0.21
ZNF546Q86UE3 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC13.77□□□□□ -0.21
ZNF546Q86UE3 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC13.77□□□□□ -0.21
ZNF546Q86UE3 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
ZNF546Q86UE3 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC13.77□□□□□ -0.21
ZNF546Q86UE3 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ZNF546Q86UE3 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC13.76□□□□□ -0.21
ZNF546Q86UE3 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
ZNF546Q86UE3 CNTNAP3P2-201ENST00000617175 3861 ntBASIC13.76□□□□□ -0.21
ZNF546Q86UE3 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
ZNF546Q86UE3 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
ZNF546Q86UE3 TMBIM7P-203ENST00000641617 1718 ntBASIC13.76□□□□□ -0.21
ZNF546Q86UE3 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC13.76□□□□□ -0.21
ZNF546Q86UE3 AL135999.2-201ENST00000622438 1686 ntBASIC13.76□□□□□ -0.21
ZNF546Q86UE3 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ZNF546Q86UE3 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
ZNF546Q86UE3 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ZNF546Q86UE3 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
ZNF546Q86UE3 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ZNF546Q86UE3 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ZNF546Q86UE3 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
ZNF546Q86UE3 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
ZNF546Q86UE3 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
ZNF546Q86UE3 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ZNF546Q86UE3 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC13.76□□□□□ -0.21
ZNF546Q86UE3 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC13.76□□□□□ -0.21
ZNF546Q86UE3 AC098590.1-201ENST00000468126 897 ntBASIC13.76□□□□□ -0.21
ZNF546Q86UE3 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
ZNF546Q86UE3 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC13.76□□□□□ -0.21
ZNF546Q86UE3 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC13.76□□□□□ -0.21
ZNF546Q86UE3 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC13.76□□□□□ -0.21
ZNF546Q86UE3 TK1-205ENST00000590862 642 ntTSL 3 BASIC13.76□□□□□ -0.21
ZNF546Q86UE3 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC13.76□□□□□ -0.21
ZNF546Q86UE3 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
ZNF546Q86UE3 GLDC-219ENST00000640208 420 ntTSL 2 BASIC13.76□□□□□ -0.21
ZNF546Q86UE3 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ZNF546Q86UE3 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
ZNF546Q86UE3 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC13.76□□□□□ -0.21
ZNF546Q86UE3 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
ZNF546Q86UE3 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
ZNF546Q86UE3 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ZNF546Q86UE3 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ZNF546Q86UE3 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
ZNF546Q86UE3 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
ZNF546Q86UE3 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ZNF546Q86UE3 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC13.76□□□□□ -0.21
ZNF546Q86UE3 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ZNF546Q86UE3 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ZNF546Q86UE3 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ZNF546Q86UE3 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ZNF546Q86UE3 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ZNF546Q86UE3 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC13.76□□□□□ -0.21
ZNF546Q86UE3 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ZNF546Q86UE3 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC13.76□□□□□ -0.21
ZNF546Q86UE3 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ZNF546Q86UE3 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
ZNF546Q86UE3 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC13.75□□□□□ -0.21
ZNF546Q86UE3 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
ZNF546Q86UE3 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
ZNF546Q86UE3 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
ZNF546Q86UE3 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ZNF546Q86UE3 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
ZNF546Q86UE3 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
ZNF546Q86UE3 AC010460.3-201ENST00000511359 1579 ntBASIC13.75□□□□□ -0.21
ZNF546Q86UE3 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
ZNF546Q86UE3 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
ZNF546Q86UE3 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ZNF546Q86UE3 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC13.75□□□□□ -0.21
ZNF546Q86UE3 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC13.75□□□□□ -0.21
ZNF546Q86UE3 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ZNF546Q86UE3 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ZNF546Q86UE3 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
ZNF546Q86UE3 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ZNF546Q86UE3 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
ZNF546Q86UE3 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC13.75□□□□□ -0.21
ZNF546Q86UE3 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
ZNF546Q86UE3 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC13.75□□□□□ -0.21
ZNF546Q86UE3 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ZNF546Q86UE3 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
ZNF546Q86UE3 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ZNF546Q86UE3 Telomerase-vert.1-201ENST00000363312 438 ntBASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms