Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
C11orf88Q6PI97 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
C11orf88Q6PI97 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
C11orf88Q6PI97 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
C11orf88Q6PI97 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC14.47□□□□□ -0.09
C11orf88Q6PI97 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
C11orf88Q6PI97 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC14.47□□□□□ -0.09
C11orf88Q6PI97 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.47□□□□□ -0.09
C11orf88Q6PI97 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
C11orf88Q6PI97 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
C11orf88Q6PI97 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
C11orf88Q6PI97 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
C11orf88Q6PI97 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC14.47□□□□□ -0.09
C11orf88Q6PI97 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
C11orf88Q6PI97 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC14.47□□□□□ -0.09
C11orf88Q6PI97 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
C11orf88Q6PI97 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
C11orf88Q6PI97 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
C11orf88Q6PI97 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC14.47□□□□□ -0.09
C11orf88Q6PI97 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC14.47□□□□□ -0.09
C11orf88Q6PI97 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
C11orf88Q6PI97 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC14.47□□□□□ -0.09
C11orf88Q6PI97 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
C11orf88Q6PI97 AC002558.1-201ENST00000488906 803 ntBASIC14.47□□□□□ -0.09
C11orf88Q6PI97 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC14.47□□□□□ -0.09
C11orf88Q6PI97 AC091304.2-201ENST00000564639 760 ntBASIC14.47□□□□□ -0.09
C11orf88Q6PI97 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC14.47□□□□□ -0.09
C11orf88Q6PI97 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC14.47□□□□□ -0.09
C11orf88Q6PI97 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC14.47□□□□□ -0.09
C11orf88Q6PI97 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
C11orf88Q6PI97 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC14.47□□□□□ -0.09
C11orf88Q6PI97 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
C11orf88Q6PI97 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.47□□□□□ -0.09
C11orf88Q6PI97 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
C11orf88Q6PI97 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
C11orf88Q6PI97 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
C11orf88Q6PI97 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC14.47□□□□□ -0.09
C11orf88Q6PI97 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
C11orf88Q6PI97 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
C11orf88Q6PI97 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
C11orf88Q6PI97 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
C11orf88Q6PI97 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
C11orf88Q6PI97 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
C11orf88Q6PI97 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
C11orf88Q6PI97 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
C11orf88Q6PI97 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
C11orf88Q6PI97 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
C11orf88Q6PI97 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
C11orf88Q6PI97 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
C11orf88Q6PI97 KRT8P47-201ENST00000604727 1398 ntBASIC14.47□□□□□ -0.09
C11orf88Q6PI97 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
C11orf88Q6PI97 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
C11orf88Q6PI97 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC14.46□□□□□ -0.09
C11orf88Q6PI97 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14.46□□□□□ -0.09
C11orf88Q6PI97 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC14.46□□□□□ -0.09
C11orf88Q6PI97 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
C11orf88Q6PI97 LINC02228-204ENST00000642115 2962 ntBASIC14.46□□□□□ -0.09
C11orf88Q6PI97 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
C11orf88Q6PI97 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC14.46□□□□□ -0.09
C11orf88Q6PI97 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
C11orf88Q6PI97 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
C11orf88Q6PI97 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
C11orf88Q6PI97 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC14.46□□□□□ -0.09
C11orf88Q6PI97 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
C11orf88Q6PI97 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
C11orf88Q6PI97 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
C11orf88Q6PI97 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
C11orf88Q6PI97 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
C11orf88Q6PI97 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
C11orf88Q6PI97 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
C11orf88Q6PI97 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
C11orf88Q6PI97 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
C11orf88Q6PI97 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
C11orf88Q6PI97 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
C11orf88Q6PI97 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
C11orf88Q6PI97 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
C11orf88Q6PI97 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
C11orf88Q6PI97 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
C11orf88Q6PI97 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
C11orf88Q6PI97 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
C11orf88Q6PI97 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
C11orf88Q6PI97 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
C11orf88Q6PI97 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.46□□□□□ -0.09
C11orf88Q6PI97 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC14.46□□□□□ -0.09
C11orf88Q6PI97 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC14.46□□□□□ -0.09
C11orf88Q6PI97 TSPY19P-201ENST00000418461 509 ntBASIC14.46□□□□□ -0.09
C11orf88Q6PI97 AC246785.2-201ENST00000432512 513 ntBASIC14.46□□□□□ -0.09
C11orf88Q6PI97 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC14.46□□□□□ -0.09
C11orf88Q6PI97 TSPY18P-201ENST00000441642 509 ntBASIC14.46□□□□□ -0.09
C11orf88Q6PI97 KRT17P6-201ENST00000453795 1220 ntBASIC14.46□□□□□ -0.09
C11orf88Q6PI97 AP000867.3-201ENST00000524675 377 ntBASIC14.46□□□□□ -0.09
C11orf88Q6PI97 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC14.46□□□□□ -0.09
C11orf88Q6PI97 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC14.46□□□□□ -0.09
C11orf88Q6PI97 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
C11orf88Q6PI97 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
C11orf88Q6PI97 GXYLT1P4-201ENST00000613576 1192 ntBASIC14.46□□□□□ -0.09
C11orf88Q6PI97 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
C11orf88Q6PI97 AC012313.10-201ENST00000623509 926 ntBASIC14.46□□□□□ -0.09
C11orf88Q6PI97 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
C11orf88Q6PI97 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms