Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CNKSR3Q6P9H4 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CNKSR3Q6P9H4 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
CNKSR3Q6P9H4 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CNKSR3Q6P9H4 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.53■□□□□ 0.4
CNKSR3Q6P9H4 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CNKSR3Q6P9H4 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CNKSR3Q6P9H4 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.53■□□□□ 0.4
CNKSR3Q6P9H4 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
CNKSR3Q6P9H4 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CNKSR3Q6P9H4 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CNKSR3Q6P9H4 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CNKSR3Q6P9H4 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CNKSR3Q6P9H4 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CNKSR3Q6P9H4 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CNKSR3Q6P9H4 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
CNKSR3Q6P9H4 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CNKSR3Q6P9H4 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CNKSR3Q6P9H4 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CNKSR3Q6P9H4 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC17.53■□□□□ 0.4
CNKSR3Q6P9H4 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CNKSR3Q6P9H4 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC17.53■□□□□ 0.4
CNKSR3Q6P9H4 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC17.53■□□□□ 0.4
CNKSR3Q6P9H4 RN7SL399P-201ENST00000471648 279 ntBASIC17.53■□□□□ 0.4
CNKSR3Q6P9H4 FXR1-221ENST00000491674 365 ntTSL 2 BASIC17.53■□□□□ 0.4
CNKSR3Q6P9H4 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC17.53■□□□□ 0.4
CNKSR3Q6P9H4 FAM8A2P-201ENST00000528813 1142 ntBASIC17.53■□□□□ 0.4
CNKSR3Q6P9H4 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
CNKSR3Q6P9H4 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC17.53■□□□□ 0.4
CNKSR3Q6P9H4 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC17.53■□□□□ 0.4
CNKSR3Q6P9H4 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC17.53■□□□□ 0.4
CNKSR3Q6P9H4 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC17.53■□□□□ 0.4
CNKSR3Q6P9H4 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC17.53■□□□□ 0.4
CNKSR3Q6P9H4 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC17.53■□□□□ 0.4
CNKSR3Q6P9H4 RPSAP52-203ENST00000622976 1023 ntBASIC17.53■□□□□ 0.4
CNKSR3Q6P9H4 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CNKSR3Q6P9H4 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CNKSR3Q6P9H4 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC17.53■□□□□ 0.4
CNKSR3Q6P9H4 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CNKSR3Q6P9H4 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.53■□□□□ 0.4
CNKSR3Q6P9H4 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CNKSR3Q6P9H4 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.53■□□□□ 0.4
CNKSR3Q6P9H4 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.53■□□□□ 0.4
CNKSR3Q6P9H4 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
CNKSR3Q6P9H4 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CNKSR3Q6P9H4 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC17.53■□□□□ 0.4
CNKSR3Q6P9H4 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC17.53■□□□□ 0.4
CNKSR3Q6P9H4 AC018665.1-201ENST00000622927 1362 ntBASIC17.53■□□□□ 0.4
CNKSR3Q6P9H4 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CNKSR3Q6P9H4 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.52■□□□□ 0.4
CNKSR3Q6P9H4 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CNKSR3Q6P9H4 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CNKSR3Q6P9H4 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CNKSR3Q6P9H4 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC17.52■□□□□ 0.4
CNKSR3Q6P9H4 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CNKSR3Q6P9H4 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CNKSR3Q6P9H4 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
CNKSR3Q6P9H4 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
CNKSR3Q6P9H4 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CNKSR3Q6P9H4 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CNKSR3Q6P9H4 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.52■□□□□ 0.4
CNKSR3Q6P9H4 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
CNKSR3Q6P9H4 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CNKSR3Q6P9H4 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CNKSR3Q6P9H4 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CNKSR3Q6P9H4 Z97205.2-201ENST00000564697 1639 ntBASIC17.52■□□□□ 0.4
CNKSR3Q6P9H4 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CNKSR3Q6P9H4 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
CNKSR3Q6P9H4 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
CNKSR3Q6P9H4 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC17.52■□□□□ 0.4
CNKSR3Q6P9H4 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC17.52■□□□□ 0.4
CNKSR3Q6P9H4 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC17.52■□□□□ 0.4
CNKSR3Q6P9H4 MFF-223ENST00000524634 647 ntTSL 2 BASIC17.52■□□□□ 0.4
CNKSR3Q6P9H4 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC17.52■□□□□ 0.4
CNKSR3Q6P9H4 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
CNKSR3Q6P9H4 AC036164.1-201ENST00000570544 333 ntBASIC17.52■□□□□ 0.4
CNKSR3Q6P9H4 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC17.52■□□□□ 0.4
CNKSR3Q6P9H4 RPS24-214ENST00000613865 538 ntTSL 5 BASIC17.52■□□□□ 0.4
CNKSR3Q6P9H4 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.52■□□□□ 0.4
CNKSR3Q6P9H4 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CNKSR3Q6P9H4 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
CNKSR3Q6P9H4 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC17.52■□□□□ 0.4
CNKSR3Q6P9H4 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.52■□□□□ 0.4
CNKSR3Q6P9H4 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.52■□□□□ 0.39
CNKSR3Q6P9H4 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CNKSR3Q6P9H4 PCGF3-213ENST00000620529 1899 ntBASIC17.52■□□□□ 0.39
CNKSR3Q6P9H4 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.52■□□□□ 0.39
CNKSR3Q6P9H4 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC17.52■□□□□ 0.39
CNKSR3Q6P9H4 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.52■□□□□ 0.39
CNKSR3Q6P9H4 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CNKSR3Q6P9H4 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
CNKSR3Q6P9H4 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CNKSR3Q6P9H4 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CNKSR3Q6P9H4 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CNKSR3Q6P9H4 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CNKSR3Q6P9H4 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
CNKSR3Q6P9H4 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CNKSR3Q6P9H4 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CNKSR3Q6P9H4 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
CNKSR3Q6P9H4 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms