Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
LINC00242Q5T6M2 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00242Q5T6M2 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00242Q5T6M2 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC11.32□□□□□ -0.6
LINC00242Q5T6M2 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
LINC00242Q5T6M2 NCF1C-201ENST00000438382 1427 ntBASIC11.32□□□□□ -0.6
LINC00242Q5T6M2 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC11.32□□□□□ -0.6
LINC00242Q5T6M2 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00242Q5T6M2 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00242Q5T6M2 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC11.32□□□□□ -0.6
LINC00242Q5T6M2 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
LINC00242Q5T6M2 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00242Q5T6M2 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC11.32□□□□□ -0.6
LINC00242Q5T6M2 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
LINC00242Q5T6M2 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC11.32□□□□□ -0.6
LINC00242Q5T6M2 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00242Q5T6M2 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
LINC00242Q5T6M2 AC131009.4-201ENST00000624048 1740 ntBASIC11.32□□□□□ -0.6
LINC00242Q5T6M2 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00242Q5T6M2 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00242Q5T6M2 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC11.32□□□□□ -0.6
LINC00242Q5T6M2 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC11.32□□□□□ -0.6
LINC00242Q5T6M2 MED25-212ENST00000618715 1467 ntTSL 5 BASIC11.32□□□□□ -0.6
LINC00242Q5T6M2 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00242Q5T6M2 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC11.31□□□□□ -0.6
LINC00242Q5T6M2 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC11.31□□□□□ -0.6
LINC00242Q5T6M2 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
LINC00242Q5T6M2 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00242Q5T6M2 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00242Q5T6M2 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC11.31□□□□□ -0.6
LINC00242Q5T6M2 HARS-204ENST00000438307 1789 ntTSL 2 BASIC11.31□□□□□ -0.6
LINC00242Q5T6M2 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00242Q5T6M2 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00242Q5T6M2 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC11.31□□□□□ -0.6
LINC00242Q5T6M2 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00242Q5T6M2 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC11.31□□□□□ -0.6
LINC00242Q5T6M2 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00242Q5T6M2 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC11.31□□□□□ -0.6
LINC00242Q5T6M2 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC11.31□□□□□ -0.6
LINC00242Q5T6M2 AC006058.4-201ENST00000624016 1670 ntBASIC11.31□□□□□ -0.6
LINC00242Q5T6M2 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00242Q5T6M2 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00242Q5T6M2 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00242Q5T6M2 AP002414.2-201ENST00000591780 3365 ntBASIC11.31□□□□□ -0.6
LINC00242Q5T6M2 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC11.31□□□□□ -0.6
LINC00242Q5T6M2 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC11.31□□□□□ -0.6
LINC00242Q5T6M2 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00242Q5T6M2 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00242Q5T6M2 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00242Q5T6M2 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC11.31□□□□□ -0.6
LINC00242Q5T6M2 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00242Q5T6M2 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00242Q5T6M2 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00242Q5T6M2 FXN-203ENST00000396366 922 ntTSL 2 BASIC11.31□□□□□ -0.6
LINC00242Q5T6M2 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00242Q5T6M2 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC11.31□□□□□ -0.6
LINC00242Q5T6M2 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00242Q5T6M2 RBSN-204ENST00000449050 903 ntTSL 2 BASIC11.31□□□□□ -0.6
LINC00242Q5T6M2 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC11.31□□□□□ -0.6
LINC00242Q5T6M2 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00242Q5T6M2 TOB2P1-201ENST00000469761 992 ntBASIC11.31□□□□□ -0.6
LINC00242Q5T6M2 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC11.31□□□□□ -0.6
LINC00242Q5T6M2 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC11.31□□□□□ -0.6
LINC00242Q5T6M2 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00242Q5T6M2 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC11.31□□□□□ -0.6
LINC00242Q5T6M2 CIB2-208ENST00000560618 804 ntTSL 2 BASIC11.31□□□□□ -0.6
LINC00242Q5T6M2 TPSP2-201ENST00000561760 610 ntBASIC11.31□□□□□ -0.6
LINC00242Q5T6M2 AC091167.2-201ENST00000579581 588 ntBASIC11.31□□□□□ -0.6
LINC00242Q5T6M2 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC11.31□□□□□ -0.6
LINC00242Q5T6M2 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC11.31□□□□□ -0.6
LINC00242Q5T6M2 AC010654.1-201ENST00000615722 808 ntBASIC11.31□□□□□ -0.6
LINC00242Q5T6M2 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00242Q5T6M2 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00242Q5T6M2 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00242Q5T6M2 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00242Q5T6M2 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
LINC00242Q5T6M2 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
LINC00242Q5T6M2 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC11.31□□□□□ -0.6
LINC00242Q5T6M2 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00242Q5T6M2 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00242Q5T6M2 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00242Q5T6M2 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00242Q5T6M2 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00242Q5T6M2 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC11.31□□□□□ -0.6
LINC00242Q5T6M2 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC11.31□□□□□ -0.6
LINC00242Q5T6M2 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00242Q5T6M2 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00242Q5T6M2 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
LINC00242Q5T6M2 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
LINC00242Q5T6M2 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
LINC00242Q5T6M2 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00242Q5T6M2 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC11.31□□□□□ -0.6
LINC00242Q5T6M2 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00242Q5T6M2 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00242Q5T6M2 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00242Q5T6M2 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00242Q5T6M2 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC11.3□□□□□ -0.6
LINC00242Q5T6M2 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00242Q5T6M2 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
LINC00242Q5T6M2 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms