Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
PTPN20Q4JDL3 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
PTPN20Q4JDL3 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PTPN20Q4JDL3 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
PTPN20Q4JDL3 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PTPN20Q4JDL3 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTPN20Q4JDL3 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
PTPN20Q4JDL3 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTPN20Q4JDL3 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTPN20Q4JDL3 AL592424.1-201ENST00000563624 1536 ntBASIC17.32■□□□□ 0.36
PTPN20Q4JDL3 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTPN20Q4JDL3 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTPN20Q4JDL3 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PTPN20Q4JDL3 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC17.32■□□□□ 0.36
PTPN20Q4JDL3 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
PTPN20Q4JDL3 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTPN20Q4JDL3 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTPN20Q4JDL3 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTPN20Q4JDL3 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC17.32■□□□□ 0.36
PTPN20Q4JDL3 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PTPN20Q4JDL3 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
PTPN20Q4JDL3 TFAMP1-201ENST00000412727 736 ntBASIC17.32■□□□□ 0.36
PTPN20Q4JDL3 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC17.32■□□□□ 0.36
PTPN20Q4JDL3 COX10-202ENST00000429152 875 ntTSL 2 BASIC17.32■□□□□ 0.36
PTPN20Q4JDL3 AL671277.1-201ENST00000429656 993 ntBASIC17.32■□□□□ 0.36
PTPN20Q4JDL3 HTR5BP-201ENST00000430851 1154 ntBASIC17.32■□□□□ 0.36
PTPN20Q4JDL3 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC17.32■□□□□ 0.36
PTPN20Q4JDL3 HOTTIP_1.1-201ENST00000620415 57 ntBASIC17.32■□□□□ 0.36
PTPN20Q4JDL3 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PTPN20Q4JDL3 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PTPN20Q4JDL3 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTPN20Q4JDL3 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PTPN20Q4JDL3 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTPN20Q4JDL3 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PTPN20Q4JDL3 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC17.32■□□□□ 0.36
PTPN20Q4JDL3 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PTPN20Q4JDL3 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.32■□□□□ 0.36
PTPN20Q4JDL3 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTPN20Q4JDL3 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC17.32■□□□□ 0.36
PTPN20Q4JDL3 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PTPN20Q4JDL3 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTPN20Q4JDL3 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.32■□□□□ 0.36
PTPN20Q4JDL3 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTPN20Q4JDL3 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTPN20Q4JDL3 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
PTPN20Q4JDL3 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTPN20Q4JDL3 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC17.31■□□□□ 0.36
PTPN20Q4JDL3 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC17.31■□□□□ 0.36
PTPN20Q4JDL3 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTPN20Q4JDL3 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.31■□□□□ 0.36
PTPN20Q4JDL3 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC17.31■□□□□ 0.36
PTPN20Q4JDL3 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PTPN20Q4JDL3 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTPN20Q4JDL3 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTPN20Q4JDL3 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
PTPN20Q4JDL3 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PTPN20Q4JDL3 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTPN20Q4JDL3 AKAP8P1-201ENST00000434743 1349 ntBASIC17.31■□□□□ 0.36
PTPN20Q4JDL3 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PTPN20Q4JDL3 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
PTPN20Q4JDL3 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTPN20Q4JDL3 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTPN20Q4JDL3 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTPN20Q4JDL3 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTPN20Q4JDL3 MKNK2P1-201ENST00000437526 628 ntBASIC17.31■□□□□ 0.36
PTPN20Q4JDL3 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.31■□□□□ 0.36
PTPN20Q4JDL3 PRYP6-201ENST00000514804 343 ntBASIC17.31■□□□□ 0.36
PTPN20Q4JDL3 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTPN20Q4JDL3 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17.31■□□□□ 0.36
PTPN20Q4JDL3 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTPN20Q4JDL3 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTPN20Q4JDL3 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTPN20Q4JDL3 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC17.31■□□□□ 0.36
PTPN20Q4JDL3 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
PTPN20Q4JDL3 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.31■□□□□ 0.36
PTPN20Q4JDL3 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
PTPN20Q4JDL3 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTPN20Q4JDL3 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
PTPN20Q4JDL3 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17.31■□□□□ 0.36
PTPN20Q4JDL3 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
PTPN20Q4JDL3 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PTPN20Q4JDL3 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC17.3■□□□□ 0.36
PTPN20Q4JDL3 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTPN20Q4JDL3 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
PTPN20Q4JDL3 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.3■□□□□ 0.36
PTPN20Q4JDL3 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.3■□□□□ 0.36
PTPN20Q4JDL3 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
PTPN20Q4JDL3 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
PTPN20Q4JDL3 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC17.3■□□□□ 0.36
PTPN20Q4JDL3 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTPN20Q4JDL3 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
PTPN20Q4JDL3 PCDHA1-201ENST00000378133 2726 ntBASIC17.3■□□□□ 0.36
PTPN20Q4JDL3 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTPN20Q4JDL3 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PTPN20Q4JDL3 AL513523.2-202ENST00000427283 2040 ntBASIC17.3■□□□□ 0.36
PTPN20Q4JDL3 BLK-205ENST00000529894 2017 ntTSL 5 BASIC17.3■□□□□ 0.36
PTPN20Q4JDL3 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PTPN20Q4JDL3 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.3■□□□□ 0.36
PTPN20Q4JDL3 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC17.3■□□□□ 0.36
PTPN20Q4JDL3 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms