Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
IRX3P78415 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
IRX3P78415 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
IRX3P78415 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
IRX3P78415 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
IRX3P78415 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
IRX3P78415 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
IRX3P78415 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC19.18■□□□□ 0.66
IRX3P78415 CETN4P-206ENST00000642099 2168 ntBASIC19.18■□□□□ 0.66
IRX3P78415 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
IRX3P78415 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
IRX3P78415 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC19.18■□□□□ 0.66
IRX3P78415 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
IRX3P78415 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
IRX3P78415 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
IRX3P78415 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
IRX3P78415 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
IRX3P78415 NME2P1-201ENST00000426182 414 ntBASIC19.18■□□□□ 0.66
IRX3P78415 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
IRX3P78415 SPTLC1P1-201ENST00000447199 261 ntBASIC19.18■□□□□ 0.66
IRX3P78415 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
IRX3P78415 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC19.18■□□□□ 0.66
IRX3P78415 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
IRX3P78415 REEP4-207ENST00000523293 913 ntTSL 3 BASIC19.18■□□□□ 0.66
IRX3P78415 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
IRX3P78415 STOM-203ENST00000538954 1257 ntTSL 5 BASIC19.18■□□□□ 0.66
IRX3P78415 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
IRX3P78415 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC19.18■□□□□ 0.66
IRX3P78415 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC19.18■□□□□ 0.66
IRX3P78415 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC19.18■□□□□ 0.66
IRX3P78415 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC19.18■□□□□ 0.66
IRX3P78415 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC19.18■□□□□ 0.66
IRX3P78415 SPTSSB-204ENST00000617024 1292 ntBASIC19.18■□□□□ 0.66
IRX3P78415 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
IRX3P78415 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
IRX3P78415 EML3-212ENST00000494176 2901 ntTSL 2 BASIC19.18■□□□□ 0.66
IRX3P78415 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC19.18■□□□□ 0.66
IRX3P78415 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
IRX3P78415 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
IRX3P78415 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
IRX3P78415 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC19.18■□□□□ 0.66
IRX3P78415 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
IRX3P78415 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
IRX3P78415 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
IRX3P78415 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
IRX3P78415 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
IRX3P78415 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
IRX3P78415 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
IRX3P78415 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC19.18■□□□□ 0.66
IRX3P78415 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
IRX3P78415 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC19.17■□□□□ 0.66
IRX3P78415 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
IRX3P78415 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
IRX3P78415 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC19.17■□□□□ 0.66
IRX3P78415 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC19.17■□□□□ 0.66
IRX3P78415 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
IRX3P78415 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC19.17■□□□□ 0.66
IRX3P78415 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
IRX3P78415 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
IRX3P78415 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC19.17■□□□□ 0.66
IRX3P78415 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
IRX3P78415 FAM220BP-201ENST00000377689 816 ntBASIC19.17■□□□□ 0.66
IRX3P78415 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC19.17■□□□□ 0.66
IRX3P78415 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
IRX3P78415 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
IRX3P78415 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC19.17■□□□□ 0.66
IRX3P78415 TMPRSS11CP-201ENST00000453277 683 ntBASIC19.17■□□□□ 0.66
IRX3P78415 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC19.17■□□□□ 0.66
IRX3P78415 QPRT-203ENST00000562473 579 ntTSL 3 BASIC19.17■□□□□ 0.66
IRX3P78415 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC19.17■□□□□ 0.66
IRX3P78415 SIGLEC29P-201ENST00000599873 1114 ntBASIC19.17■□□□□ 0.66
IRX3P78415 AL589739.1-201ENST00000607720 493 ntBASIC19.17■□□□□ 0.66
IRX3P78415 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
IRX3P78415 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
IRX3P78415 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
IRX3P78415 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
IRX3P78415 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
IRX3P78415 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
IRX3P78415 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
IRX3P78415 TUBB8P12-201ENST00000308911 1335 ntBASIC19.17■□□□□ 0.66
IRX3P78415 TUBB7P-202ENST00000428444 1305 ntBASIC19.17■□□□□ 0.66
IRX3P78415 TUBB8P7-204ENST00000567960 1332 ntBASIC19.17■□□□□ 0.66
IRX3P78415 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
IRX3P78415 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
IRX3P78415 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
IRX3P78415 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
IRX3P78415 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC19.17■□□□□ 0.66
IRX3P78415 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
IRX3P78415 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
IRX3P78415 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
IRX3P78415 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
IRX3P78415 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
IRX3P78415 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
IRX3P78415 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC19.16■□□□□ 0.66
IRX3P78415 AC073439.1-201ENST00000624121 1774 ntBASIC19.16■□□□□ 0.66
IRX3P78415 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
IRX3P78415 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
IRX3P78415 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
IRX3P78415 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
IRX3P78415 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms