Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
AP1S1P61966 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.57■□□□□ 0.24
AP1S1P61966 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
AP1S1P61966 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
AP1S1P61966 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
AP1S1P61966 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.57■□□□□ 0.24
AP1S1P61966 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
AP1S1P61966 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
AP1S1P61966 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
AP1S1P61966 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
AP1S1P61966 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.56■□□□□ 0.24
AP1S1P61966 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
AP1S1P61966 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
AP1S1P61966 AL589702.1-201ENST00000641229 1509 ntBASIC16.56■□□□□ 0.24
AP1S1P61966 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
AP1S1P61966 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
AP1S1P61966 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
AP1S1P61966 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.56■□□□□ 0.24
AP1S1P61966 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
AP1S1P61966 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
AP1S1P61966 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
AP1S1P61966 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.56■□□□□ 0.24
AP1S1P61966 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC16.56■□□□□ 0.24
AP1S1P61966 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.56■□□□□ 0.24
AP1S1P61966 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
AP1S1P61966 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
AP1S1P61966 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
AP1S1P61966 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC16.56■□□□□ 0.24
AP1S1P61966 FAM58DP-201ENST00000428076 619 ntBASIC16.56■□□□□ 0.24
AP1S1P61966 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.56■□□□□ 0.24
AP1S1P61966 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
AP1S1P61966 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
AP1S1P61966 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC16.56■□□□□ 0.24
AP1S1P61966 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.56■□□□□ 0.24
AP1S1P61966 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.56■□□□□ 0.24
AP1S1P61966 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC16.56■□□□□ 0.24
AP1S1P61966 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.56■□□□□ 0.24
AP1S1P61966 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
AP1S1P61966 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
AP1S1P61966 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
AP1S1P61966 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
AP1S1P61966 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
AP1S1P61966 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
AP1S1P61966 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.56■□□□□ 0.24
AP1S1P61966 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.56■□□□□ 0.24
AP1S1P61966 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.56■□□□□ 0.24
AP1S1P61966 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
AP1S1P61966 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.56■□□□□ 0.24
AP1S1P61966 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
AP1S1P61966 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.55■□□□□ 0.24
AP1S1P61966 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
AP1S1P61966 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
AP1S1P61966 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
AP1S1P61966 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.55■□□□□ 0.24
AP1S1P61966 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
AP1S1P61966 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC16.55■□□□□ 0.24
AP1S1P61966 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
AP1S1P61966 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
AP1S1P61966 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
AP1S1P61966 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
AP1S1P61966 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
AP1S1P61966 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
AP1S1P61966 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
AP1S1P61966 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
AP1S1P61966 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
AP1S1P61966 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
AP1S1P61966 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
AP1S1P61966 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC16.55■□□□□ 0.24
AP1S1P61966 FAM220BP-201ENST00000377689 816 ntBASIC16.55■□□□□ 0.24
AP1S1P61966 HLA-H-201ENST00000383620 1096 ntBASIC16.55■□□□□ 0.24
AP1S1P61966 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.55■□□□□ 0.24
AP1S1P61966 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
AP1S1P61966 TSEN15P1-201ENST00000423257 515 ntBASIC16.55■□□□□ 0.24
AP1S1P61966 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
AP1S1P61966 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC16.55■□□□□ 0.24
AP1S1P61966 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
AP1S1P61966 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC16.55■□□□□ 0.24
AP1S1P61966 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC16.55■□□□□ 0.24
AP1S1P61966 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.55■□□□□ 0.24
AP1S1P61966 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.55■□□□□ 0.24
AP1S1P61966 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
AP1S1P61966 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
AP1S1P61966 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
AP1S1P61966 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
AP1S1P61966 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
AP1S1P61966 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
AP1S1P61966 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.55■□□□□ 0.24
AP1S1P61966 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.55■□□□□ 0.24
AP1S1P61966 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
AP1S1P61966 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
AP1S1P61966 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.54■□□□□ 0.24
AP1S1P61966 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.54■□□□□ 0.24
AP1S1P61966 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.54■□□□□ 0.24
AP1S1P61966 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
AP1S1P61966 AC005052.1-201ENST00000625181 2492 ntBASIC16.54■□□□□ 0.24
AP1S1P61966 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
AP1S1P61966 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
AP1S1P61966 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
AP1S1P61966 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
AP1S1P61966 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms