Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
AP3S2P59780 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
AP3S2P59780 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
AP3S2P59780 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
AP3S2P59780 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
AP3S2P59780 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
AP3S2P59780 AC126335.2-201ENST00000623362 4637 ntBASIC14.21□□□□□ -0.13
AP3S2P59780 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC14.21□□□□□ -0.13
AP3S2P59780 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC14.21□□□□□ -0.13
AP3S2P59780 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
AP3S2P59780 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
AP3S2P59780 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
AP3S2P59780 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC14.21□□□□□ -0.13
AP3S2P59780 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
AP3S2P59780 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
AP3S2P59780 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
AP3S2P59780 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
AP3S2P59780 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
AP3S2P59780 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
AP3S2P59780 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC14.21□□□□□ -0.13
AP3S2P59780 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.21□□□□□ -0.13
AP3S2P59780 AC016027.1-202ENST00000607927 1699 ntBASIC14.21□□□□□ -0.13
AP3S2P59780 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC14.21□□□□□ -0.13
AP3S2P59780 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
AP3S2P59780 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
AP3S2P59780 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC14.21□□□□□ -0.13
AP3S2P59780 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
AP3S2P59780 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
AP3S2P59780 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC14.21□□□□□ -0.13
AP3S2P59780 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC14.21□□□□□ -0.13
AP3S2P59780 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC14.21□□□□□ -0.13
AP3S2P59780 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
AP3S2P59780 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
AP3S2P59780 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
AP3S2P59780 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
AP3S2P59780 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
AP3S2P59780 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
AP3S2P59780 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
AP3S2P59780 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
AP3S2P59780 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
AP3S2P59780 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.21□□□□□ -0.14
AP3S2P59780 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC14.21□□□□□ -0.14
AP3S2P59780 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.21□□□□□ -0.14
AP3S2P59780 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
AP3S2P59780 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC14.21□□□□□ -0.14
AP3S2P59780 LINC01144-201ENST00000626198 1710 ntBASIC14.21□□□□□ -0.14
AP3S2P59780 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.21□□□□□ -0.14
AP3S2P59780 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.14
AP3S2P59780 REXO1L8P-201ENST00000604378 1897 ntBASIC14.21□□□□□ -0.14
AP3S2P59780 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
AP3S2P59780 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
AP3S2P59780 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC14.2□□□□□ -0.14
AP3S2P59780 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
AP3S2P59780 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
AP3S2P59780 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
AP3S2P59780 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
AP3S2P59780 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
AP3S2P59780 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
AP3S2P59780 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
AP3S2P59780 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
AP3S2P59780 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
AP3S2P59780 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
AP3S2P59780 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
AP3S2P59780 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
AP3S2P59780 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC14.2□□□□□ -0.14
AP3S2P59780 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
AP3S2P59780 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
AP3S2P59780 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.2□□□□□ -0.14
AP3S2P59780 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
AP3S2P59780 ECEL1P3-201ENST00000427961 737 ntBASIC14.2□□□□□ -0.14
AP3S2P59780 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC14.2□□□□□ -0.14
AP3S2P59780 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC14.2□□□□□ -0.14
AP3S2P59780 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
AP3S2P59780 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC14.2□□□□□ -0.14
AP3S2P59780 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC14.2□□□□□ -0.14
AP3S2P59780 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC14.2□□□□□ -0.14
AP3S2P59780 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC14.2□□□□□ -0.14
AP3S2P59780 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
AP3S2P59780 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
AP3S2P59780 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
AP3S2P59780 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
AP3S2P59780 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC14.2□□□□□ -0.14
AP3S2P59780 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
AP3S2P59780 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC14.2□□□□□ -0.14
AP3S2P59780 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
AP3S2P59780 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
AP3S2P59780 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
AP3S2P59780 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC14.2□□□□□ -0.14
AP3S2P59780 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
AP3S2P59780 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
AP3S2P59780 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC14.2□□□□□ -0.14
AP3S2P59780 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
AP3S2P59780 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
AP3S2P59780 AC007292.2-201ENST00000593524 1812 ntBASIC14.2□□□□□ -0.14
AP3S2P59780 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
AP3S2P59780 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
AP3S2P59780 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC14.2□□□□□ -0.14
AP3S2P59780 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
AP3S2P59780 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
AP3S2P59780 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms