Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CLRN1P58418 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CLRN1P58418 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
CLRN1P58418 DOC2GP-204ENST00000639052 2548 ntBASIC14.76□□□□□ -0.05
CLRN1P58418 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CLRN1P58418 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CLRN1P58418 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLRN1P58418 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLRN1P58418 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CLRN1P58418 MIR600HG-201ENST00000449175 5984 ntBASIC14.76□□□□□ -0.05
CLRN1P58418 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
CLRN1P58418 ZNF259P1-201ENST00000407656 1365 ntBASIC14.76□□□□□ -0.05
CLRN1P58418 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLRN1P58418 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC14.76□□□□□ -0.05
CLRN1P58418 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC14.76□□□□□ -0.05
CLRN1P58418 GCK-209ENST00000616242 2260 ntTSL 5 BASIC14.76□□□□□ -0.05
CLRN1P58418 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLRN1P58418 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
CLRN1P58418 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC14.76□□□□□ -0.05
CLRN1P58418 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLRN1P58418 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC14.76□□□□□ -0.05
CLRN1P58418 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CLRN1P58418 LINC01144-201ENST00000626198 1710 ntBASIC14.76□□□□□ -0.05
CLRN1P58418 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC14.76□□□□□ -0.05
CLRN1P58418 BEX3-201ENST00000361298 921 ntTSL 2 BASIC14.76□□□□□ -0.05
CLRN1P58418 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CLRN1P58418 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CLRN1P58418 DPM2-202ENST00000373110 738 ntTSL 2 BASIC14.76□□□□□ -0.05
CLRN1P58418 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
CLRN1P58418 RNU1-129P-201ENST00000384064 167 ntBASIC14.76□□□□□ -0.05
CLRN1P58418 HMGA1P7-201ENST00000406908 502 ntBASIC14.76□□□□□ -0.05
CLRN1P58418 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC14.76□□□□□ -0.05
CLRN1P58418 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC14.76□□□□□ -0.05
CLRN1P58418 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
CLRN1P58418 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC14.76□□□□□ -0.05
CLRN1P58418 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC14.76□□□□□ -0.05
CLRN1P58418 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC14.76□□□□□ -0.05
CLRN1P58418 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
CLRN1P58418 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC14.76□□□□□ -0.05
CLRN1P58418 AC145285.3-201ENST00000564603 959 ntBASIC14.76□□□□□ -0.05
CLRN1P58418 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
CLRN1P58418 U1.21-201ENST00000580816 167 ntBASIC14.76□□□□□ -0.05
CLRN1P58418 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
CLRN1P58418 AC064836.3-201ENST00000607928 673 ntBASIC14.76□□□□□ -0.05
CLRN1P58418 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
CLRN1P58418 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLRN1P58418 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLRN1P58418 CYP2T1P-202ENST00000641596 2535 ntBASIC14.76□□□□□ -0.05
CLRN1P58418 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
CLRN1P58418 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLRN1P58418 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLRN1P58418 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLRN1P58418 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLRN1P58418 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLRN1P58418 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
CLRN1P58418 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC14.76□□□□□ -0.05
CLRN1P58418 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLRN1P58418 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLRN1P58418 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLRN1P58418 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CLRN1P58418 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLRN1P58418 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.75□□□□□ -0.05
CLRN1P58418 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLRN1P58418 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CLRN1P58418 NORAD-201ENST00000565493 5339 ntBASIC14.75□□□□□ -0.05
CLRN1P58418 AC067930.6-201ENST00000623257 4947 ntBASIC14.75□□□□□ -0.05
CLRN1P58418 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLRN1P58418 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLRN1P58418 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLRN1P58418 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLRN1P58418 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC14.75□□□□□ -0.05
CLRN1P58418 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLRN1P58418 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
CLRN1P58418 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC14.75□□□□□ -0.05
CLRN1P58418 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC14.75□□□□□ -0.05
CLRN1P58418 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
CLRN1P58418 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLRN1P58418 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
CLRN1P58418 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CLRN1P58418 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLRN1P58418 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC14.75□□□□□ -0.05
CLRN1P58418 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CLRN1P58418 PMS2P4-201ENST00000412466 1052 ntBASIC14.75□□□□□ -0.05
CLRN1P58418 AC007967.2-201ENST00000432613 625 ntBASIC14.75□□□□□ -0.05
CLRN1P58418 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC14.75□□□□□ -0.05
CLRN1P58418 FDX1P1-201ENST00000449115 551 ntBASIC14.75□□□□□ -0.05
CLRN1P58418 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC14.75□□□□□ -0.05
CLRN1P58418 AC034105.1-201ENST00000563488 319 ntBASIC14.75□□□□□ -0.05
CLRN1P58418 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC14.75□□□□□ -0.05
CLRN1P58418 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
CLRN1P58418 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC14.75□□□□□ -0.05
CLRN1P58418 AC120114.3-201ENST00000611923 658 ntBASIC14.75□□□□□ -0.05
CLRN1P58418 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLRN1P58418 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC14.75□□□□□ -0.05
CLRN1P58418 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLRN1P58418 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
CLRN1P58418 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLRN1P58418 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CLRN1P58418 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC14.75□□□□□ -0.05
CLRN1P58418 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms