Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
CLDN8P56748 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC15.7■□□□□ 0.1
CLDN8P56748 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN8P56748 RPS2P28-201ENST00000314255 741 ntBASIC15.7■□□□□ 0.1
CLDN8P56748 CD99-202ENST00000381180 530 ntTSL 2 BASIC15.7■□□□□ 0.1
CLDN8P56748 CENPM-204ENST00000402420 688 ntTSL 5 BASIC15.7■□□□□ 0.1
CLDN8P56748 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC15.7■□□□□ 0.1
CLDN8P56748 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC15.7■□□□□ 0.1
CLDN8P56748 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN8P56748 AL160237.2-201ENST00000556165 472 ntBASIC15.7■□□□□ 0.1
CLDN8P56748 AC021097.1-201ENST00000607902 574 ntBASIC15.7■□□□□ 0.1
CLDN8P56748 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
CLDN8P56748 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN8P56748 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN8P56748 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN8P56748 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN8P56748 AC069224.1-201ENST00000566372 1715 ntBASIC15.7■□□□□ 0.1
CLDN8P56748 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15.7■□□□□ 0.1
CLDN8P56748 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC15.7■□□□□ 0.1
CLDN8P56748 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CLDN8P56748 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN8P56748 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.7■□□□□ 0.1
CLDN8P56748 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN8P56748 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN8P56748 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN8P56748 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN8P56748 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC15.7■□□□□ 0.1
CLDN8P56748 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CLDN8P56748 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC15.7■□□□□ 0.1
CLDN8P56748 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLDN8P56748 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC15.69■□□□□ 0.1
CLDN8P56748 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CLDN8P56748 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.69■□□□□ 0.1
CLDN8P56748 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLDN8P56748 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLDN8P56748 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLDN8P56748 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLDN8P56748 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLDN8P56748 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CLDN8P56748 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLDN8P56748 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC15.69■□□□□ 0.1
CLDN8P56748 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLDN8P56748 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLDN8P56748 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC15.69■□□□□ 0.1
CLDN8P56748 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.69■□□□□ 0.1
CLDN8P56748 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CLDN8P56748 RNU1-129P-201ENST00000384064 167 ntBASIC15.69■□□□□ 0.1
CLDN8P56748 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC15.69■□□□□ 0.1
CLDN8P56748 AF186996.4-201ENST00000467186 377 ntBASIC15.69■□□□□ 0.1
CLDN8P56748 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC15.69■□□□□ 0.1
CLDN8P56748 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
CLDN8P56748 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC15.69■□□□□ 0.1
CLDN8P56748 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CLDN8P56748 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC15.69■□□□□ 0.1
CLDN8P56748 U1.21-201ENST00000580816 167 ntBASIC15.69■□□□□ 0.1
CLDN8P56748 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC15.69■□□□□ 0.1
CLDN8P56748 AL121912.1-201ENST00000603683 238 ntBASIC15.69■□□□□ 0.1
CLDN8P56748 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC15.69■□□□□ 0.1
CLDN8P56748 ACE-203ENST00000413513 2237 ntTSL 2 BASIC15.69■□□□□ 0.1
CLDN8P56748 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC15.69■□□□□ 0.1
CLDN8P56748 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CLDN8P56748 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLDN8P56748 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC15.69■□□□□ 0.1
CLDN8P56748 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CLDN8P56748 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLDN8P56748 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.69■□□□□ 0.1
CLDN8P56748 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLDN8P56748 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLDN8P56748 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CLDN8P56748 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLDN8P56748 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLDN8P56748 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLDN8P56748 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLDN8P56748 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
CLDN8P56748 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
CLDN8P56748 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CLDN8P56748 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLDN8P56748 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.68■□□□□ 0.1
CLDN8P56748 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLDN8P56748 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLDN8P56748 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC15.68■□□□□ 0.1
CLDN8P56748 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLDN8P56748 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CLDN8P56748 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLDN8P56748 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC15.68■□□□□ 0.1
CLDN8P56748 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC15.68■□□□□ 0.1
CLDN8P56748 HMGA1P7-201ENST00000406908 502 ntBASIC15.68■□□□□ 0.1
CLDN8P56748 KRT18P67-201ENST00000432816 1264 ntBASIC15.68■□□□□ 0.1
CLDN8P56748 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC15.68■□□□□ 0.1
CLDN8P56748 EMBP1-201ENST00000458200 901 ntBASIC15.68■□□□□ 0.1
CLDN8P56748 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CLDN8P56748 MOK-208ENST00000519058 917 ntTSL 2 BASIC15.68■□□□□ 0.1
CLDN8P56748 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC15.68■□□□□ 0.1
CLDN8P56748 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC15.68■□□□□ 0.1
CLDN8P56748 MIR3909-201ENST00000579518 119 ntBASIC15.68■□□□□ 0.1
CLDN8P56748 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLDN8P56748 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.68■□□□□ 0.1
CLDN8P56748 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC15.68■□□□□ 0.1
CLDN8P56748 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLDN8P56748 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms