Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
EPHA4P54764 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
EPHA4P54764 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
EPHA4P54764 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
EPHA4P54764 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC15.84■□□□□ 0.13
EPHA4P54764 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC15.84■□□□□ 0.13
EPHA4P54764 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
EPHA4P54764 AC017007.3-201ENST00000479865 435 ntBASIC15.84■□□□□ 0.13
EPHA4P54764 SATB1-217ENST00000493952 626 ntTSL 3 BASIC15.84■□□□□ 0.13
EPHA4P54764 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
EPHA4P54764 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC15.84■□□□□ 0.13
EPHA4P54764 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
EPHA4P54764 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
EPHA4P54764 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
EPHA4P54764 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
EPHA4P54764 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
EPHA4P54764 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
EPHA4P54764 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
EPHA4P54764 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15.84■□□□□ 0.13
EPHA4P54764 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
EPHA4P54764 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC15.83■□□□□ 0.13
EPHA4P54764 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.83■□□□□ 0.13
EPHA4P54764 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
EPHA4P54764 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
EPHA4P54764 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
EPHA4P54764 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
EPHA4P54764 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
EPHA4P54764 GGT4P-201ENST00000623672 1708 ntBASIC15.83■□□□□ 0.13
EPHA4P54764 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
EPHA4P54764 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
EPHA4P54764 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
EPHA4P54764 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
EPHA4P54764 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
EPHA4P54764 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
EPHA4P54764 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
EPHA4P54764 CALY-203ENST00000368558 825 ntTSL 5 BASIC15.83■□□□□ 0.12
EPHA4P54764 FAM207CP-201ENST00000443486 507 ntBASIC15.83■□□□□ 0.12
EPHA4P54764 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC15.83■□□□□ 0.12
EPHA4P54764 AC027369.6-201ENST00000525520 931 ntBASIC15.83■□□□□ 0.12
EPHA4P54764 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC15.83■□□□□ 0.12
EPHA4P54764 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC15.83■□□□□ 0.12
EPHA4P54764 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
EPHA4P54764 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC15.83■□□□□ 0.12
EPHA4P54764 LITAF-210ENST00000571976 548 ntTSL 2 BASIC15.83■□□□□ 0.12
EPHA4P54764 LITAF-214ENST00000574703 486 ntTSL 2 BASIC15.83■□□□□ 0.12
EPHA4P54764 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC15.83■□□□□ 0.12
EPHA4P54764 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC15.83■□□□□ 0.12
EPHA4P54764 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
EPHA4P54764 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC15.83■□□□□ 0.12
EPHA4P54764 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC15.83■□□□□ 0.12
EPHA4P54764 SPDYE12P-201ENST00000618416 771 ntBASIC15.83■□□□□ 0.12
EPHA4P54764 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC15.83■□□□□ 0.12
EPHA4P54764 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
EPHA4P54764 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
EPHA4P54764 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
EPHA4P54764 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC15.83■□□□□ 0.12
EPHA4P54764 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
EPHA4P54764 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
EPHA4P54764 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC15.83■□□□□ 0.12
EPHA4P54764 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
EPHA4P54764 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC15.83■□□□□ 0.12
EPHA4P54764 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
EPHA4P54764 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
EPHA4P54764 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
EPHA4P54764 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
EPHA4P54764 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.83■□□□□ 0.12
EPHA4P54764 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC15.82■□□□□ 0.12
EPHA4P54764 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC15.82■□□□□ 0.12
EPHA4P54764 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
EPHA4P54764 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
EPHA4P54764 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
EPHA4P54764 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
EPHA4P54764 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
EPHA4P54764 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC15.82■□□□□ 0.12
EPHA4P54764 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
EPHA4P54764 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
EPHA4P54764 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
EPHA4P54764 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
EPHA4P54764 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
EPHA4P54764 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
EPHA4P54764 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
EPHA4P54764 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC15.82■□□□□ 0.12
EPHA4P54764 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC15.82■□□□□ 0.12
EPHA4P54764 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
EPHA4P54764 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC15.82■□□□□ 0.12
EPHA4P54764 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC15.82■□□□□ 0.12
EPHA4P54764 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
EPHA4P54764 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
EPHA4P54764 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
EPHA4P54764 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
EPHA4P54764 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC15.82■□□□□ 0.12
EPHA4P54764 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
EPHA4P54764 AC100757.3-201ENST00000622361 1406 ntBASIC15.82■□□□□ 0.12
EPHA4P54764 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC15.82■□□□□ 0.12
EPHA4P54764 AL589702.1-201ENST00000641229 1509 ntBASIC15.82■□□□□ 0.12
EPHA4P54764 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
EPHA4P54764 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
EPHA4P54764 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
EPHA4P54764 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
EPHA4P54764 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms