Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LIMK2P53671 CYP2A7P1-201ENST00000595391 815 ntBASIC16.65■□□□□ 0.26
LIMK2P53671 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC16.65■□□□□ 0.26
LIMK2P53671 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.65■□□□□ 0.26
LIMK2P53671 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.65■□□□□ 0.26
LIMK2P53671 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.65■□□□□ 0.26
LIMK2P53671 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LIMK2P53671 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.65■□□□□ 0.26
LIMK2P53671 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
LIMK2P53671 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.65■□□□□ 0.26
LIMK2P53671 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
LIMK2P53671 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.65■□□□□ 0.26
LIMK2P53671 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.65■□□□□ 0.26
LIMK2P53671 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LIMK2P53671 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LIMK2P53671 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
LIMK2P53671 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
LIMK2P53671 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LIMK2P53671 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.65■□□□□ 0.26
LIMK2P53671 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.65■□□□□ 0.26
LIMK2P53671 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
LIMK2P53671 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.26
LIMK2P53671 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.64■□□□□ 0.26
LIMK2P53671 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.64■□□□□ 0.26
LIMK2P53671 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
LIMK2P53671 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.64■□□□□ 0.25
LIMK2P53671 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LIMK2P53671 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.64■□□□□ 0.25
LIMK2P53671 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LIMK2P53671 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LIMK2P53671 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LIMK2P53671 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC16.64■□□□□ 0.25
LIMK2P53671 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LIMK2P53671 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.64■□□□□ 0.25
LIMK2P53671 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
LIMK2P53671 IGLL3P-201ENST00000412472 434 ntBASIC16.64■□□□□ 0.25
LIMK2P53671 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.64■□□□□ 0.25
LIMK2P53671 AP006288.1-201ENST00000446065 395 ntBASIC16.64■□□□□ 0.25
LIMK2P53671 DNAJB3-202ENST00000449667 1266 ntBASIC16.64■□□□□ 0.25
LIMK2P53671 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC16.64■□□□□ 0.25
LIMK2P53671 YBX1P5-201ENST00000509441 847 ntBASIC16.64■□□□□ 0.25
LIMK2P53671 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC16.64■□□□□ 0.25
LIMK2P53671 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC16.64■□□□□ 0.25
LIMK2P53671 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.64■□□□□ 0.25
LIMK2P53671 C20orf181-201ENST00000623918 480 ntBASIC16.64■□□□□ 0.25
LIMK2P53671 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LIMK2P53671 AL353732.1-201ENST00000569618 1459 ntBASIC16.64■□□□□ 0.25
LIMK2P53671 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LIMK2P53671 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LIMK2P53671 AC006449.6-201ENST00000612330 2296 ntBASIC16.64■□□□□ 0.25
LIMK2P53671 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LIMK2P53671 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LIMK2P53671 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LIMK2P53671 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.64■□□□□ 0.25
LIMK2P53671 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.64■□□□□ 0.25
LIMK2P53671 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.64■□□□□ 0.25
LIMK2P53671 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LIMK2P53671 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LIMK2P53671 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
LIMK2P53671 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LIMK2P53671 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LIMK2P53671 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
LIMK2P53671 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LIMK2P53671 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.64■□□□□ 0.25
LIMK2P53671 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
LIMK2P53671 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.64■□□□□ 0.25
LIMK2P53671 GPAA1P2-202ENST00000606848 1787 ntBASIC16.64■□□□□ 0.25
LIMK2P53671 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
LIMK2P53671 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.63■□□□□ 0.25
LIMK2P53671 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LIMK2P53671 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
LIMK2P53671 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.63■□□□□ 0.25
LIMK2P53671 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
LIMK2P53671 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
LIMK2P53671 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LIMK2P53671 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
LIMK2P53671 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
LIMK2P53671 PCGF3-213ENST00000620529 1899 ntBASIC16.63■□□□□ 0.25
LIMK2P53671 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.63■□□□□ 0.25
LIMK2P53671 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LIMK2P53671 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LIMK2P53671 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
LIMK2P53671 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
LIMK2P53671 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.63■□□□□ 0.25
LIMK2P53671 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LIMK2P53671 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LIMK2P53671 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
LIMK2P53671 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LIMK2P53671 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LIMK2P53671 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LIMK2P53671 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
LIMK2P53671 PMS2P2-201ENST00000425039 1128 ntBASIC16.63■□□□□ 0.25
LIMK2P53671 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.63■□□□□ 0.25
LIMK2P53671 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC16.63■□□□□ 0.25
LIMK2P53671 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC16.63■□□□□ 0.25
LIMK2P53671 AC096734.2-201ENST00000562054 433 ntBASIC16.63■□□□□ 0.25
LIMK2P53671 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC16.63■□□□□ 0.25
LIMK2P53671 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16.63■□□□□ 0.25
LIMK2P53671 AL513190.1-201ENST00000621254 727 ntBASIC16.63■□□□□ 0.25
LIMK2P53671 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms