Protein–RNA interactions for Protein: P50747

HLCS, Biotin--protein ligase, humanhuman

Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLCSP50747 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HLCSP50747 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
HLCSP50747 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.83■□□□□ 0.12
HLCSP50747 HLA-A-202ENST00000376806 1854 ntBASIC15.83■□□□□ 0.12
HLCSP50747 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HLCSP50747 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HLCSP50747 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC15.83■□□□□ 0.12
HLCSP50747 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HLCSP50747 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC15.83■□□□□ 0.12
HLCSP50747 HNRNPA1P28-201ENST00000424481 961 ntBASIC15.83■□□□□ 0.12
HLCSP50747 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC15.83■□□□□ 0.12
HLCSP50747 KRT18P2-201ENST00000447938 1258 ntBASIC15.83■□□□□ 0.12
HLCSP50747 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC15.83■□□□□ 0.12
HLCSP50747 HCG4B-203ENST00000450128 991 ntBASIC15.83■□□□□ 0.12
HLCSP50747 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC15.83■□□□□ 0.12
HLCSP50747 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
HLCSP50747 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HLCSP50747 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC15.83■□□□□ 0.12
HLCSP50747 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
HLCSP50747 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC15.83■□□□□ 0.12
HLCSP50747 AC139530.3-201ENST00000620344 690 ntBASIC15.83■□□□□ 0.12
HLCSP50747 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HLCSP50747 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HLCSP50747 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
HLCSP50747 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HLCSP50747 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HLCSP50747 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
HLCSP50747 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HLCSP50747 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HLCSP50747 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HLCSP50747 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HLCSP50747 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
HLCSP50747 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.83■□□□□ 0.12
HLCSP50747 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HLCSP50747 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HLCSP50747 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
HLCSP50747 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.83■□□□□ 0.12
HLCSP50747 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HLCSP50747 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
HLCSP50747 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
HLCSP50747 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
HLCSP50747 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HLCSP50747 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HLCSP50747 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.83■□□□□ 0.12
HLCSP50747 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HLCSP50747 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.82■□□□□ 0.12
HLCSP50747 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
HLCSP50747 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC15.82■□□□□ 0.12
HLCSP50747 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
HLCSP50747 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
HLCSP50747 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.82■□□□□ 0.12
HLCSP50747 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
HLCSP50747 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
HLCSP50747 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
HLCSP50747 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HLCSP50747 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HLCSP50747 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.82■□□□□ 0.12
HLCSP50747 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC15.82■□□□□ 0.12
HLCSP50747 PMP22-202ENST00000395936 816 ntTSL 3 BASIC15.82■□□□□ 0.12
HLCSP50747 MIR1233-2-201ENST00000408138 82 ntBASIC15.82■□□□□ 0.12
HLCSP50747 MIR1233-1-201ENST00000408722 82 ntBASIC15.82■□□□□ 0.12
HLCSP50747 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC15.82■□□□□ 0.12
HLCSP50747 AC004832.2-201ENST00000426397 482 ntBASIC15.82■□□□□ 0.12
HLCSP50747 DNAJB3-201ENST00000446806 729 ntBASIC15.82■□□□□ 0.12
HLCSP50747 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HLCSP50747 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC15.82■□□□□ 0.12
HLCSP50747 CD63-210ENST00000550776 870 ntTSL 5 BASIC15.82■□□□□ 0.12
HLCSP50747 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC15.82■□□□□ 0.12
HLCSP50747 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC15.82■□□□□ 0.12
HLCSP50747 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC15.82■□□□□ 0.12
HLCSP50747 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC15.82■□□□□ 0.12
HLCSP50747 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC15.82■□□□□ 0.12
HLCSP50747 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC15.82■□□□□ 0.12
HLCSP50747 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HLCSP50747 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HLCSP50747 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
HLCSP50747 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
HLCSP50747 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
HLCSP50747 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
HLCSP50747 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
HLCSP50747 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
HLCSP50747 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC15.82■□□□□ 0.12
HLCSP50747 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
HLCSP50747 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HLCSP50747 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HLCSP50747 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HLCSP50747 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
HLCSP50747 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HLCSP50747 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
HLCSP50747 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HLCSP50747 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
HLCSP50747 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HLCSP50747 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
HLCSP50747 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC15.81■□□□□ 0.12
HLCSP50747 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC15.81■□□□□ 0.12
HLCSP50747 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HLCSP50747 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
HLCSP50747 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HLCSP50747 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
HLCSP50747 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms