Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
CENPFP49454 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CENPFP49454 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CENPFP49454 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CENPFP49454 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CENPFP49454 TPO-206ENST00000382269 1155 ntTSL 5 BASIC18.29■□□□□ 0.52
CENPFP49454 SPDYE17-201ENST00000412399 783 ntBASIC18.29■□□□□ 0.52
CENPFP49454 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC18.29■□□□□ 0.52
CENPFP49454 TIMM17BP1-201ENST00000545713 516 ntBASIC18.29■□□□□ 0.52
CENPFP49454 HNRNPUP1-201ENST00000554987 333 ntBASIC18.29■□□□□ 0.52
CENPFP49454 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC18.29■□□□□ 0.52
CENPFP49454 AL365330.1-201ENST00000607459 531 ntBASIC18.29■□□□□ 0.52
CENPFP49454 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CENPFP49454 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.29■□□□□ 0.52
CENPFP49454 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.29■□□□□ 0.52
CENPFP49454 CES3-203ENST00000543856 3178 ntTSL 2 BASIC18.29■□□□□ 0.52
CENPFP49454 RHBDF1P1-201ENST00000427504 1941 ntBASIC18.29■□□□□ 0.52
CENPFP49454 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC18.29■□□□□ 0.52
CENPFP49454 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.29■□□□□ 0.52
CENPFP49454 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.29■□□□□ 0.52
CENPFP49454 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC18.29■□□□□ 0.52
CENPFP49454 RPL28-203ENST00000428193 573 ntTSL 2 BASIC18.29■□□□□ 0.52
CENPFP49454 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CENPFP49454 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CENPFP49454 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC18.29■□□□□ 0.52
CENPFP49454 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC18.29■□□□□ 0.52
CENPFP49454 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC18.29■□□□□ 0.52
CENPFP49454 RPL28-207ENST00000558815 616 ntTSL 2 BASIC18.29■□□□□ 0.52
CENPFP49454 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CENPFP49454 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC18.29■□□□□ 0.52
CENPFP49454 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18.29■□□□□ 0.52
CENPFP49454 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
CENPFP49454 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CENPFP49454 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.29■□□□□ 0.52
CENPFP49454 AC116353.5-201ENST00000638148 1699 ntBASIC18.28■□□□□ 0.52
CENPFP49454 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CENPFP49454 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC18.28■□□□□ 0.52
CENPFP49454 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC18.28■□□□□ 0.52
CENPFP49454 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CENPFP49454 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CENPFP49454 AC133539.2-201ENST00000604757 467 ntBASIC18.28■□□□□ 0.52
CENPFP49454 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
CENPFP49454 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CENPFP49454 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CENPFP49454 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CENPFP49454 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
CENPFP49454 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC18.28■□□□□ 0.52
CENPFP49454 SIGLEC29P-201ENST00000599873 1114 ntBASIC18.28■□□□□ 0.52
CENPFP49454 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC18.28■□□□□ 0.52
CENPFP49454 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CENPFP49454 AL021920.2-201ENST00000624828 1351 ntBASIC18.28■□□□□ 0.52
CENPFP49454 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CENPFP49454 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CENPFP49454 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC18.28■□□□□ 0.52
CENPFP49454 FHL2-212ENST00000607522 759 ntTSL 2 BASIC18.28■□□□□ 0.52
CENPFP49454 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CENPFP49454 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
CENPFP49454 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC18.28■□□□□ 0.52
CENPFP49454 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CENPFP49454 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC18.27■□□□□ 0.52
CENPFP49454 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CENPFP49454 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
CENPFP49454 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
CENPFP49454 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CENPFP49454 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CENPFP49454 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
CENPFP49454 VMO1-203ENST00000416307 712 ntTSL 2 BASIC18.27■□□□□ 0.52
CENPFP49454 AC093724.1-201ENST00000448659 1027 ntBASIC18.27■□□□□ 0.52
CENPFP49454 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC18.27■□□□□ 0.52
CENPFP49454 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC18.27■□□□□ 0.52
CENPFP49454 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC18.27■□□□□ 0.52
CENPFP49454 RARRES2P5-201ENST00000564013 466 ntBASIC18.27■□□□□ 0.52
CENPFP49454 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC18.27■□□□□ 0.52
CENPFP49454 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC18.27■□□□□ 0.52
CENPFP49454 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC18.27■□□□□ 0.52
CENPFP49454 AC026740.1-201ENST00000607068 791 ntBASIC18.27■□□□□ 0.52
CENPFP49454 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CENPFP49454 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CENPFP49454 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CENPFP49454 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC18.27■□□□□ 0.52
CENPFP49454 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CENPFP49454 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CENPFP49454 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
CENPFP49454 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CENPFP49454 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CENPFP49454 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
CENPFP49454 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.27■□□□□ 0.52
CENPFP49454 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CENPFP49454 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CENPFP49454 APOA1-205ENST00000375329 927 ntTSL 2 BASIC18.27■□□□□ 0.52
CENPFP49454 CNN2P8-201ENST00000421872 913 ntBASIC18.27■□□□□ 0.52
CENPFP49454 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC18.27■□□□□ 0.52
CENPFP49454 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC18.27■□□□□ 0.52
CENPFP49454 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC18.27■□□□□ 0.52
CENPFP49454 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC18.27■□□□□ 0.52
CENPFP49454 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CENPFP49454 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CENPFP49454 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CENPFP49454 AC011676.5-201ENST00000624864 2660 ntBASIC18.27■□□□□ 0.51
CENPFP49454 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms