Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC13.1□□□□□ -0.31
CDC34P49427 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC13.1□□□□□ -0.31
CDC34P49427 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CDC34P49427 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
CDC34P49427 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CDC34P49427 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CDC34P49427 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CDC34P49427 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CDC34P49427 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC13.1□□□□□ -0.31
CDC34P49427 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC13.1□□□□□ -0.31
CDC34P49427 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
CDC34P49427 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC13.1□□□□□ -0.31
CDC34P49427 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
CDC34P49427 Z83836.1-201ENST00000624605 1642 ntBASIC13.1□□□□□ -0.31
CDC34P49427 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC13.09□□□□□ -0.31
CDC34P49427 PPT1-215ENST00000641471 2368 ntBASIC13.09□□□□□ -0.31
CDC34P49427 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
CDC34P49427 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CDC34P49427 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC13.09□□□□□ -0.31
CDC34P49427 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC13.09□□□□□ -0.31
CDC34P49427 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC13.09□□□□□ -0.31
CDC34P49427 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CDC34P49427 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC13.09□□□□□ -0.31
CDC34P49427 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC13.09□□□□□ -0.31
CDC34P49427 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CDC34P49427 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
CDC34P49427 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC13.09□□□□□ -0.31
CDC34P49427 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CDC34P49427 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CDC34P49427 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CDC34P49427 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CDC34P49427 BAALC-202ENST00000306391 243 ntTSL 5 BASIC13.09□□□□□ -0.31
CDC34P49427 BAALC-204ENST00000330955 222 ntTSL 5 BASIC13.09□□□□□ -0.31
CDC34P49427 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CDC34P49427 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
CDC34P49427 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
CDC34P49427 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CDC34P49427 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
CDC34P49427 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC13.09□□□□□ -0.31
CDC34P49427 ACTG1P4-201ENST00000425123 1122 ntBASIC13.09□□□□□ -0.31
CDC34P49427 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CDC34P49427 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
CDC34P49427 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CDC34P49427 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC13.09□□□□□ -0.31
CDC34P49427 GUSBP12-201ENST00000513727 720 ntBASIC13.09□□□□□ -0.31
CDC34P49427 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CDC34P49427 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
CDC34P49427 AL671710.1-201ENST00000610245 2349 ntBASIC13.09□□□□□ -0.31
CDC34P49427 AL138966.2-201ENST00000621997 464 ntBASIC13.09□□□□□ -0.31
CDC34P49427 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CDC34P49427 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CDC34P49427 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
CDC34P49427 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CDC34P49427 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
CDC34P49427 AC023157.3-201ENST00000619086 2088 ntBASIC13.09□□□□□ -0.31
CDC34P49427 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CDC34P49427 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
CDC34P49427 FAM45BP-202ENST00000592932 1624 ntBASIC13.09□□□□□ -0.31
CDC34P49427 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CDC34P49427 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
CDC34P49427 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC13.08□□□□□ -0.31
CDC34P49427 WARS-232ENST00000556645 2508 ntTSL 5 BASIC13.08□□□□□ -0.32
CDC34P49427 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC13.08□□□□□ -0.32
CDC34P49427 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CDC34P49427 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC13.08□□□□□ -0.32
CDC34P49427 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC13.08□□□□□ -0.32
CDC34P49427 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CDC34P49427 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CDC34P49427 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CDC34P49427 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CDC34P49427 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CDC34P49427 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
CDC34P49427 MMP23A-201ENST00000234610 1017 ntBASIC13.08□□□□□ -0.32
CDC34P49427 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC13.08□□□□□ -0.32
CDC34P49427 AP002414.1-201ENST00000391405 1147 ntBASIC13.08□□□□□ -0.32
CDC34P49427 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CDC34P49427 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
CDC34P49427 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC13.08□□□□□ -0.32
CDC34P49427 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CDC34P49427 CD320-202ENST00000537716 1119 ntTSL 2 BASIC13.08□□□□□ -0.32
CDC34P49427 AL441883.1-201ENST00000566170 1045 ntBASIC13.08□□□□□ -0.32
CDC34P49427 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CDC34P49427 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC13.08□□□□□ -0.32
CDC34P49427 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC13.08□□□□□ -0.32
CDC34P49427 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC13.08□□□□□ -0.32
CDC34P49427 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CDC34P49427 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
CDC34P49427 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC13.08□□□□□ -0.32
CDC34P49427 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CDC34P49427 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC13.08□□□□□ -0.32
CDC34P49427 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
CDC34P49427 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC13.08□□□□□ -0.32
CDC34P49427 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC13.08□□□□□ -0.32
CDC34P49427 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CDC34P49427 AC112504.1-201ENST00000623415 1841 ntBASIC13.08□□□□□ -0.32
CDC34P49427 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
CDC34P49427 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CDC34P49427 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC13.08□□□□□ -0.32
CDC34P49427 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC13.08□□□□□ -0.32
CDC34P49427 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms