Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SLC6A12P48065 MIR648-201ENST00000385046 94 ntBASIC15.88■□□□□ 0.13
SLC6A12P48065 AL022342.1-201ENST00000400363 863 ntBASIC15.88■□□□□ 0.13
SLC6A12P48065 IMP4-203ENST00000409935 958 ntTSL 5 BASIC15.88■□□□□ 0.13
SLC6A12P48065 AC023274.1-201ENST00000418278 595 ntBASIC15.88■□□□□ 0.13
SLC6A12P48065 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC15.88■□□□□ 0.13
SLC6A12P48065 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SLC6A12P48065 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC15.88■□□□□ 0.13
SLC6A12P48065 KRT18P58-201ENST00000527480 1120 ntBASIC15.88■□□□□ 0.13
SLC6A12P48065 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC15.88■□□□□ 0.13
SLC6A12P48065 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC15.88■□□□□ 0.13
SLC6A12P48065 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC15.88■□□□□ 0.13
SLC6A12P48065 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC15.88■□□□□ 0.13
SLC6A12P48065 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC6A12P48065 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
SLC6A12P48065 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SLC6A12P48065 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC6A12P48065 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SLC6A12P48065 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC6A12P48065 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC15.88■□□□□ 0.13
SLC6A12P48065 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
SLC6A12P48065 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC6A12P48065 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC15.88■□□□□ 0.13
SLC6A12P48065 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
SLC6A12P48065 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC6A12P48065 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SLC6A12P48065 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
SLC6A12P48065 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SLC6A12P48065 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC15.87■□□□□ 0.13
SLC6A12P48065 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC15.87■□□□□ 0.13
SLC6A12P48065 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
SLC6A12P48065 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC15.87■□□□□ 0.13
SLC6A12P48065 PGR-209ENST00000617858 2816 ntTSL 5 BASIC15.87■□□□□ 0.13
SLC6A12P48065 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC15.87■□□□□ 0.13
SLC6A12P48065 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SLC6A12P48065 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SLC6A12P48065 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SLC6A12P48065 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
SLC6A12P48065 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
SLC6A12P48065 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC15.87■□□□□ 0.13
SLC6A12P48065 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC15.87■□□□□ 0.13
SLC6A12P48065 PRYP6-201ENST00000514804 343 ntBASIC15.87■□□□□ 0.13
SLC6A12P48065 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC15.87■□□□□ 0.13
SLC6A12P48065 AC040169.1-201ENST00000565382 521 ntBASIC15.87■□□□□ 0.13
SLC6A12P48065 RARRES2P8-201ENST00000566335 367 ntBASIC15.87■□□□□ 0.13
SLC6A12P48065 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
SLC6A12P48065 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC15.87■□□□□ 0.13
SLC6A12P48065 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
SLC6A12P48065 AL671883.3-201ENST00000603274 991 ntBASIC15.87■□□□□ 0.13
SLC6A12P48065 AC091812.2-201ENST00000619081 385 ntBASIC15.87■□□□□ 0.13
SLC6A12P48065 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SLC6A12P48065 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC15.87■□□□□ 0.13
SLC6A12P48065 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC15.87■□□□□ 0.13
SLC6A12P48065 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SLC6A12P48065 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SLC6A12P48065 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SLC6A12P48065 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SLC6A12P48065 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SLC6A12P48065 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC15.87■□□□□ 0.13
SLC6A12P48065 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SLC6A12P48065 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC15.87■□□□□ 0.13
SLC6A12P48065 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SLC6A12P48065 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
SLC6A12P48065 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC15.87■□□□□ 0.13
SLC6A12P48065 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SLC6A12P48065 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC15.87■□□□□ 0.13
SLC6A12P48065 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SLC6A12P48065 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SLC6A12P48065 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SLC6A12P48065 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SLC6A12P48065 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC15.86■□□□□ 0.13
SLC6A12P48065 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
SLC6A12P48065 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
SLC6A12P48065 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC15.86■□□□□ 0.13
SLC6A12P48065 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SLC6A12P48065 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
SLC6A12P48065 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
SLC6A12P48065 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SLC6A12P48065 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SLC6A12P48065 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SLC6A12P48065 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
SLC6A12P48065 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
SLC6A12P48065 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
SLC6A12P48065 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
SLC6A12P48065 MCCD1P2-201ENST00000423228 335 ntBASIC15.86■□□□□ 0.13
SLC6A12P48065 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC15.86■□□□□ 0.13
SLC6A12P48065 INO80E-210ENST00000567705 880 ntTSL 3 BASIC15.86■□□□□ 0.13
SLC6A12P48065 AC002347.1-201ENST00000569543 541 ntBASIC15.86■□□□□ 0.13
SLC6A12P48065 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC15.86■□□□□ 0.13
SLC6A12P48065 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SLC6A12P48065 FHL2-212ENST00000607522 759 ntTSL 2 BASIC15.86■□□□□ 0.13
SLC6A12P48065 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.86■□□□□ 0.13
SLC6A12P48065 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SLC6A12P48065 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SLC6A12P48065 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.86■□□□□ 0.13
SLC6A12P48065 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC15.86■□□□□ 0.13
SLC6A12P48065 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
SLC6A12P48065 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SLC6A12P48065 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SLC6A12P48065 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms