Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NKX2-1P43699 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
NKX2-1P43699 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC13.57□□□□□ -0.24
NKX2-1P43699 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC13.57□□□□□ -0.24
NKX2-1P43699 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC13.57□□□□□ -0.24
NKX2-1P43699 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC13.57□□□□□ -0.24
NKX2-1P43699 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NKX2-1P43699 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC13.57□□□□□ -0.24
NKX2-1P43699 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
NKX2-1P43699 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
NKX2-1P43699 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC13.57□□□□□ -0.24
NKX2-1P43699 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC13.57□□□□□ -0.24
NKX2-1P43699 YBX1P2-201ENST00000489612 999 ntBASIC13.57□□□□□ -0.24
NKX2-1P43699 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
NKX2-1P43699 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NKX2-1P43699 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
NKX2-1P43699 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC13.57□□□□□ -0.24
NKX2-1P43699 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
NKX2-1P43699 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
NKX2-1P43699 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
NKX2-1P43699 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
NKX2-1P43699 ABBA01031661.1-201ENST00000634362 1253 ntBASIC13.57□□□□□ -0.24
NKX2-1P43699 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
NKX2-1P43699 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC13.57□□□□□ -0.24
NKX2-1P43699 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
NKX2-1P43699 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC13.57□□□□□ -0.24
NKX2-1P43699 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC13.57□□□□□ -0.24
NKX2-1P43699 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC13.57□□□□□ -0.24
NKX2-1P43699 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
NKX2-1P43699 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
NKX2-1P43699 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC13.57□□□□□ -0.24
NKX2-1P43699 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
NKX2-1P43699 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
NKX2-1P43699 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC13.57□□□□□ -0.24
NKX2-1P43699 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
NKX2-1P43699 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
NKX2-1P43699 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NKX2-1P43699 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
NKX2-1P43699 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NKX2-1P43699 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NKX2-1P43699 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
NKX2-1P43699 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NKX2-1P43699 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
NKX2-1P43699 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC13.56□□□□□ -0.24
NKX2-1P43699 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC13.56□□□□□ -0.24
NKX2-1P43699 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
NKX2-1P43699 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
NKX2-1P43699 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
NKX2-1P43699 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NKX2-1P43699 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NKX2-1P43699 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NKX2-1P43699 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC13.56□□□□□ -0.24
NKX2-1P43699 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
NKX2-1P43699 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
NKX2-1P43699 CTNS-203ENST00000399306 803 ntTSL 3 BASIC13.56□□□□□ -0.24
NKX2-1P43699 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
NKX2-1P43699 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
NKX2-1P43699 AC112907.2-201ENST00000448639 330 ntBASIC13.56□□□□□ -0.24
NKX2-1P43699 POU5F1P6-201ENST00000466990 990 ntBASIC13.56□□□□□ -0.24
NKX2-1P43699 TK2-213ENST00000563369 882 ntTSL 5 BASIC13.56□□□□□ -0.24
NKX2-1P43699 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
NKX2-1P43699 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC13.56□□□□□ -0.24
NKX2-1P43699 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NKX2-1P43699 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
NKX2-1P43699 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
NKX2-1P43699 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
NKX2-1P43699 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NKX2-1P43699 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NKX2-1P43699 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC13.56□□□□□ -0.24
NKX2-1P43699 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC13.56□□□□□ -0.24
NKX2-1P43699 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
NKX2-1P43699 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
NKX2-1P43699 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NKX2-1P43699 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC13.56□□□□□ -0.24
NKX2-1P43699 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC13.56□□□□□ -0.24
NKX2-1P43699 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
NKX2-1P43699 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NKX2-1P43699 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NKX2-1P43699 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
NKX2-1P43699 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
NKX2-1P43699 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NKX2-1P43699 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
NKX2-1P43699 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NKX2-1P43699 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
NKX2-1P43699 AC112504.1-201ENST00000623415 1841 ntBASIC13.55□□□□□ -0.24
NKX2-1P43699 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NKX2-1P43699 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NKX2-1P43699 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NKX2-1P43699 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
NKX2-1P43699 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
NKX2-1P43699 REXO1L8P-201ENST00000604378 1897 ntBASIC13.55□□□□□ -0.24
NKX2-1P43699 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
NKX2-1P43699 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
NKX2-1P43699 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
NKX2-1P43699 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NKX2-1P43699 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC13.55□□□□□ -0.24
NKX2-1P43699 LINC02228-204ENST00000642115 2962 ntBASIC13.55□□□□□ -0.24
NKX2-1P43699 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC13.55□□□□□ -0.24
NKX2-1P43699 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NKX2-1P43699 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms