Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC17.27■□□□□ 0.36
SLC1A1P43005 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SLC1A1P43005 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
SLC1A1P43005 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SLC1A1P43005 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
SLC1A1P43005 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC17.27■□□□□ 0.36
SLC1A1P43005 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SLC1A1P43005 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
SLC1A1P43005 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
SLC1A1P43005 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
SLC1A1P43005 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SLC1A1P43005 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC17.27■□□□□ 0.36
SLC1A1P43005 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC17.27■□□□□ 0.36
SLC1A1P43005 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC17.27■□□□□ 0.36
SLC1A1P43005 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SLC1A1P43005 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SLC1A1P43005 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SLC1A1P43005 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SLC1A1P43005 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SLC1A1P43005 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.27■□□□□ 0.36
SLC1A1P43005 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SLC1A1P43005 AC079781.3-201ENST00000449110 356 ntBASIC17.27■□□□□ 0.36
SLC1A1P43005 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.27■□□□□ 0.36
SLC1A1P43005 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SLC1A1P43005 RN7SL510P-201ENST00000581311 263 ntBASIC17.27■□□□□ 0.36
SLC1A1P43005 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC17.27■□□□□ 0.36
SLC1A1P43005 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.27■□□□□ 0.36
SLC1A1P43005 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
SLC1A1P43005 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SLC1A1P43005 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC17.27■□□□□ 0.36
SLC1A1P43005 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC17.27■□□□□ 0.36
SLC1A1P43005 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SLC1A1P43005 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SLC1A1P43005 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SLC1A1P43005 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SLC1A1P43005 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
SLC1A1P43005 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SLC1A1P43005 CDC14C-201ENST00000428251 1719 ntBASIC17.27■□□□□ 0.35
SLC1A1P43005 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
SLC1A1P43005 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.35
SLC1A1P43005 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC17.27■□□□□ 0.35
SLC1A1P43005 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC1A1P43005 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC1A1P43005 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
SLC1A1P43005 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC1A1P43005 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC1A1P43005 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
SLC1A1P43005 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.26■□□□□ 0.35
SLC1A1P43005 AC010491.1-201ENST00000563101 2797 ntBASIC17.26■□□□□ 0.35
SLC1A1P43005 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC17.26■□□□□ 0.35
SLC1A1P43005 SUPT20HL2-201ENST00000486479 2409 ntBASIC17.26■□□□□ 0.35
SLC1A1P43005 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
SLC1A1P43005 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC1A1P43005 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SLC1A1P43005 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC17.26■□□□□ 0.35
SLC1A1P43005 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.26■□□□□ 0.35
SLC1A1P43005 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
SLC1A1P43005 AL031284.1-201ENST00000419297 478 ntBASIC17.26■□□□□ 0.35
SLC1A1P43005 VN2R19P-201ENST00000442399 1052 ntBASIC17.26■□□□□ 0.35
SLC1A1P43005 AL513480.1-201ENST00000451731 511 ntBASIC17.26■□□□□ 0.35
SLC1A1P43005 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.26■□□□□ 0.35
SLC1A1P43005 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.26■□□□□ 0.35
SLC1A1P43005 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.26■□□□□ 0.35
SLC1A1P43005 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.26■□□□□ 0.35
SLC1A1P43005 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC1A1P43005 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.26■□□□□ 0.35
SLC1A1P43005 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC17.26■□□□□ 0.35
SLC1A1P43005 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SLC1A1P43005 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SLC1A1P43005 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.26■□□□□ 0.35
SLC1A1P43005 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SLC1A1P43005 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
SLC1A1P43005 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17.26■□□□□ 0.35
SLC1A1P43005 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC17.26■□□□□ 0.35
SLC1A1P43005 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC1A1P43005 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC1A1P43005 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC1A1P43005 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.26■□□□□ 0.35
SLC1A1P43005 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC1A1P43005 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC1A1P43005 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
SLC1A1P43005 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC17.26■□□□□ 0.35
SLC1A1P43005 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
SLC1A1P43005 LINC02447-202ENST00000501888 2146 ntBASIC17.26■□□□□ 0.35
SLC1A1P43005 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SLC1A1P43005 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
SLC1A1P43005 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC17.25■□□□□ 0.35
SLC1A1P43005 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SLC1A1P43005 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLC1A1P43005 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.25■□□□□ 0.35
SLC1A1P43005 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
SLC1A1P43005 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
SLC1A1P43005 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLC1A1P43005 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC17.25■□□□□ 0.35
SLC1A1P43005 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLC1A1P43005 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLC1A1P43005 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
SLC1A1P43005 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLC1A1P43005 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLC1A1P43005 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms