Protein–RNA interactions for Protein: P35790

CHKA, Choline kinase alpha, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKAP35790 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CHKAP35790 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHKAP35790 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHKAP35790 LINC00554-201ENST00000564841 3011 ntBASIC17.43■□□□□ 0.38
CHKAP35790 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHKAP35790 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHKAP35790 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC17.43■□□□□ 0.38
CHKAP35790 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHKAP35790 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHKAP35790 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHKAP35790 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHKAP35790 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CHKAP35790 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHKAP35790 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.42■□□□□ 0.38
CHKAP35790 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHKAP35790 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
CHKAP35790 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHKAP35790 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
CHKAP35790 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.42■□□□□ 0.38
CHKAP35790 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC17.42■□□□□ 0.38
CHKAP35790 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHKAP35790 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC17.42■□□□□ 0.38
CHKAP35790 HMGA1P7-201ENST00000406908 502 ntBASIC17.42■□□□□ 0.38
CHKAP35790 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CHKAP35790 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC17.42■□□□□ 0.38
CHKAP35790 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC17.42■□□□□ 0.38
CHKAP35790 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC17.42■□□□□ 0.38
CHKAP35790 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CHKAP35790 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.42■□□□□ 0.38
CHKAP35790 FAM86C2P-203ENST00000528684 1004 ntBASIC17.42■□□□□ 0.38
CHKAP35790 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.42■□□□□ 0.38
CHKAP35790 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC17.42■□□□□ 0.38
CHKAP35790 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC17.42■□□□□ 0.38
CHKAP35790 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC17.42■□□□□ 0.38
CHKAP35790 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHKAP35790 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC17.42■□□□□ 0.38
CHKAP35790 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CHKAP35790 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CHKAP35790 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHKAP35790 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC17.42■□□□□ 0.38
CHKAP35790 OR6D1P-203ENST00000641209 4860 ntBASIC17.42■□□□□ 0.38
CHKAP35790 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CHKAP35790 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHKAP35790 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CHKAP35790 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC17.42■□□□□ 0.38
CHKAP35790 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHKAP35790 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHKAP35790 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHKAP35790 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHKAP35790 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.42■□□□□ 0.38
CHKAP35790 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
CHKAP35790 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CHKAP35790 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHKAP35790 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHKAP35790 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
CHKAP35790 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
CHKAP35790 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.41■□□□□ 0.38
CHKAP35790 KRT8P49-201ENST00000604166 1432 ntBASIC17.41■□□□□ 0.38
CHKAP35790 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.41■□□□□ 0.38
CHKAP35790 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.41■□□□□ 0.38
CHKAP35790 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CHKAP35790 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHKAP35790 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHKAP35790 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CHKAP35790 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHKAP35790 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC17.41■□□□□ 0.38
CHKAP35790 AC087641.1-201ENST00000557561 1021 ntBASIC17.41■□□□□ 0.38
CHKAP35790 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC17.41■□□□□ 0.38
CHKAP35790 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC17.41■□□□□ 0.38
CHKAP35790 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHKAP35790 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CHKAP35790 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHKAP35790 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHKAP35790 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHKAP35790 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHKAP35790 TUBB8P12-201ENST00000308911 1335 ntBASIC17.41■□□□□ 0.38
CHKAP35790 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHKAP35790 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHKAP35790 TUBB7P-202ENST00000428444 1305 ntBASIC17.41■□□□□ 0.38
CHKAP35790 TUBB8P7-204ENST00000567960 1332 ntBASIC17.41■□□□□ 0.38
CHKAP35790 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHKAP35790 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHKAP35790 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
CHKAP35790 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CHKAP35790 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC17.4■□□□□ 0.38
CHKAP35790 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.4■□□□□ 0.38
CHKAP35790 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHKAP35790 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CHKAP35790 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CHKAP35790 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
CHKAP35790 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CHKAP35790 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHKAP35790 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CHKAP35790 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHKAP35790 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHKAP35790 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
CHKAP35790 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC17.4■□□□□ 0.38
CHKAP35790 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
CHKAP35790 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC17.4■□□□□ 0.38
CHKAP35790 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms