Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC18.82■□□□□ 0.6
CLCN1P35523 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.82■□□□□ 0.6
CLCN1P35523 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.82■□□□□ 0.6
CLCN1P35523 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.82■□□□□ 0.6
CLCN1P35523 MPI-205ENST00000562606 1052 ntTSL 3 BASIC18.82■□□□□ 0.6
CLCN1P35523 AL445228.2-201ENST00000605589 952 ntBASIC18.82■□□□□ 0.6
CLCN1P35523 AC019129.2-201ENST00000609837 1235 ntBASIC18.82■□□□□ 0.6
CLCN1P35523 AL358472.4-201ENST00000633140 710 ntBASIC18.82■□□□□ 0.6
CLCN1P35523 AP000550.4-202ENST00000639755 178 ntBASIC18.82■□□□□ 0.6
CLCN1P35523 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
CLCN1P35523 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CLCN1P35523 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC18.82■□□□□ 0.6
CLCN1P35523 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLCN1P35523 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLCN1P35523 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CLCN1P35523 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLCN1P35523 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC18.82■□□□□ 0.6
CLCN1P35523 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CLCN1P35523 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CLCN1P35523 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CLCN1P35523 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CLCN1P35523 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC18.82■□□□□ 0.6
CLCN1P35523 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CLCN1P35523 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC18.82■□□□□ 0.6
CLCN1P35523 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLCN1P35523 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLCN1P35523 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC18.82■□□□□ 0.6
CLCN1P35523 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLCN1P35523 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLCN1P35523 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC18.81■□□□□ 0.6
CLCN1P35523 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLCN1P35523 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLCN1P35523 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CLCN1P35523 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CLCN1P35523 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC18.81■□□□□ 0.6
CLCN1P35523 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18.81■□□□□ 0.6
CLCN1P35523 KRT18P1-202ENST00000452408 1331 ntBASIC18.81■□□□□ 0.6
CLCN1P35523 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC18.81■□□□□ 0.6
CLCN1P35523 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CLCN1P35523 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLCN1P35523 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
CLCN1P35523 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CLCN1P35523 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CLCN1P35523 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLCN1P35523 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLCN1P35523 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CLCN1P35523 COPS8-203ENST00000409334 794 ntTSL 5 BASIC18.81■□□□□ 0.6
CLCN1P35523 AC002558.1-201ENST00000488906 803 ntBASIC18.81■□□□□ 0.6
CLCN1P35523 TPSP2-201ENST00000561760 610 ntBASIC18.81■□□□□ 0.6
CLCN1P35523 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
CLCN1P35523 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.81■□□□□ 0.6
CLCN1P35523 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CLCN1P35523 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC18.81■□□□□ 0.6
CLCN1P35523 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC18.81■□□□□ 0.6
CLCN1P35523 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC18.81■□□□□ 0.6
CLCN1P35523 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CLCN1P35523 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLCN1P35523 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CLCN1P35523 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLCN1P35523 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CLCN1P35523 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.81■□□□□ 0.6
CLCN1P35523 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLCN1P35523 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CLCN1P35523 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLCN1P35523 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CLCN1P35523 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18.81■□□□□ 0.6
CLCN1P35523 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CLCN1P35523 AC233702.3-201ENST00000578656 1387 ntBASIC18.81■□□□□ 0.6
CLCN1P35523 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
CLCN1P35523 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CLCN1P35523 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CLCN1P35523 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC18.8■□□□□ 0.6
CLCN1P35523 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC18.8■□□□□ 0.6
CLCN1P35523 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CLCN1P35523 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLCN1P35523 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC18.8■□□□□ 0.6
CLCN1P35523 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLCN1P35523 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CLCN1P35523 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CLCN1P35523 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC18.8■□□□□ 0.6
CLCN1P35523 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLCN1P35523 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLCN1P35523 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
CLCN1P35523 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLCN1P35523 DRAXINP1-201ENST00000437611 948 ntBASIC18.8■□□□□ 0.6
CLCN1P35523 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CLCN1P35523 MIR3180-1-201ENST00000580374 94 ntBASIC18.8■□□□□ 0.6
CLCN1P35523 MIR3180-3-201ENST00000584616 94 ntBASIC18.8■□□□□ 0.6
CLCN1P35523 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC18.8■□□□□ 0.6
CLCN1P35523 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLCN1P35523 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CLCN1P35523 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLCN1P35523 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC18.8■□□□□ 0.6
CLCN1P35523 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CLCN1P35523 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLCN1P35523 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLCN1P35523 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC18.8■□□□□ 0.6
CLCN1P35523 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLCN1P35523 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLCN1P35523 ARHGAP23P1-201ENST00000562773 1937 ntBASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms