Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC18.71■□□□□ 0.59
HOXA13P31271 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC18.71■□□□□ 0.59
HOXA13P31271 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HOXA13P31271 FAM8A3P-201ENST00000427218 844 ntBASIC18.71■□□□□ 0.59
HOXA13P31271 AC092580.3-201ENST00000430932 139 ntBASIC18.71■□□□□ 0.59
HOXA13P31271 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC18.71■□□□□ 0.59
HOXA13P31271 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
HOXA13P31271 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC18.71■□□□□ 0.59
HOXA13P31271 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HOXA13P31271 AL096865.1-201ENST00000606796 927 ntBASIC18.71■□□□□ 0.59
HOXA13P31271 COQ4-205ENST00000609948 956 ntTSL 2 BASIC18.71■□□□□ 0.59
HOXA13P31271 AC007967.4-201ENST00000614700 386 ntBASIC18.71■□□□□ 0.59
HOXA13P31271 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HOXA13P31271 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HOXA13P31271 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
HOXA13P31271 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
HOXA13P31271 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
HOXA13P31271 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HOXA13P31271 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC18.71■□□□□ 0.59
HOXA13P31271 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HOXA13P31271 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HOXA13P31271 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
HOXA13P31271 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC18.71■□□□□ 0.59
HOXA13P31271 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HOXA13P31271 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HOXA13P31271 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
HOXA13P31271 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC18.71■□□□□ 0.58
HOXA13P31271 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
HOXA13P31271 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
HOXA13P31271 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
HOXA13P31271 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
HOXA13P31271 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HOXA13P31271 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
HOXA13P31271 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
HOXA13P31271 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HOXA13P31271 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HOXA13P31271 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
HOXA13P31271 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
HOXA13P31271 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
HOXA13P31271 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC18.7■□□□□ 0.58
HOXA13P31271 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC18.7■□□□□ 0.58
HOXA13P31271 AQP6-203ENST00000551733 849 ntTSL 3 BASIC18.7■□□□□ 0.58
HOXA13P31271 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC18.7■□□□□ 0.58
HOXA13P31271 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HOXA13P31271 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HOXA13P31271 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC18.7■□□□□ 0.58
HOXA13P31271 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC18.7■□□□□ 0.58
HOXA13P31271 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HOXA13P31271 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HOXA13P31271 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.7■□□□□ 0.58
HOXA13P31271 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC18.7■□□□□ 0.58
HOXA13P31271 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HOXA13P31271 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC18.69■□□□□ 0.58
HOXA13P31271 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC18.69■□□□□ 0.58
HOXA13P31271 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HOXA13P31271 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HOXA13P31271 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HOXA13P31271 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
HOXA13P31271 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HOXA13P31271 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC18.69■□□□□ 0.58
HOXA13P31271 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
HOXA13P31271 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HOXA13P31271 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
HOXA13P31271 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
HOXA13P31271 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC18.69■□□□□ 0.58
HOXA13P31271 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
HOXA13P31271 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC18.69■□□□□ 0.58
HOXA13P31271 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HOXA13P31271 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HOXA13P31271 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC18.69■□□□□ 0.58
HOXA13P31271 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC18.69■□□□□ 0.58
HOXA13P31271 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC18.69■□□□□ 0.58
HOXA13P31271 BANF1P1-201ENST00000553684 263 ntBASIC18.69■□□□□ 0.58
HOXA13P31271 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC18.69■□□□□ 0.58
HOXA13P31271 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC18.69■□□□□ 0.58
HOXA13P31271 LINC02084-201ENST00000606069 1096 ntBASIC18.69■□□□□ 0.58
HOXA13P31271 AL158211.3-201ENST00000607385 239 ntBASIC18.69■□□□□ 0.58
HOXA13P31271 SPDYE12P-201ENST00000618416 771 ntBASIC18.69■□□□□ 0.58
HOXA13P31271 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC18.69■□□□□ 0.58
HOXA13P31271 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HOXA13P31271 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
HOXA13P31271 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC18.69■□□□□ 0.58
HOXA13P31271 NKILA-202ENST00000614771 2598 ntBASIC18.69■□□□□ 0.58
HOXA13P31271 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC18.69■□□□□ 0.58
HOXA13P31271 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC18.69■□□□□ 0.58
HOXA13P31271 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
HOXA13P31271 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC18.69■□□□□ 0.58
HOXA13P31271 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.69■□□□□ 0.58
HOXA13P31271 LINC01144-201ENST00000626198 1710 ntBASIC18.69■□□□□ 0.58
HOXA13P31271 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HOXA13P31271 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HOXA13P31271 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
HOXA13P31271 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HOXA13P31271 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
HOXA13P31271 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
HOXA13P31271 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
HOXA13P31271 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC18.68■□□□□ 0.58
HOXA13P31271 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HOXA13P31271 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HOXA13P31271 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms