Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RAB3BP20337 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.52□□□□□ -0.09
RAB3BP20337 LINC01144-201ENST00000626198 1710 ntBASIC14.52□□□□□ -0.09
RAB3BP20337 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RAB3BP20337 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RAB3BP20337 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
RAB3BP20337 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.51□□□□□ -0.09
RAB3BP20337 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAB3BP20337 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAB3BP20337 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC14.51□□□□□ -0.09
RAB3BP20337 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.51□□□□□ -0.09
RAB3BP20337 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.51□□□□□ -0.09
RAB3BP20337 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAB3BP20337 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAB3BP20337 KRT8P39-201ENST00000396270 1433 ntBASIC14.51□□□□□ -0.09
RAB3BP20337 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC14.51□□□□□ -0.09
RAB3BP20337 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.51□□□□□ -0.09
RAB3BP20337 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAB3BP20337 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAB3BP20337 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAB3BP20337 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
RAB3BP20337 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC14.51□□□□□ -0.09
RAB3BP20337 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAB3BP20337 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAB3BP20337 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAB3BP20337 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAB3BP20337 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC14.51□□□□□ -0.09
RAB3BP20337 LINC00982-205ENST00000420957 435 ntBASIC14.51□□□□□ -0.09
RAB3BP20337 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC14.51□□□□□ -0.09
RAB3BP20337 SPDYE13P-201ENST00000445314 798 ntBASIC14.51□□□□□ -0.09
RAB3BP20337 VENTXP7-201ENST00000475503 772 ntBASIC14.51□□□□□ -0.09
RAB3BP20337 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC14.51□□□□□ -0.09
RAB3BP20337 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC14.51□□□□□ -0.09
RAB3BP20337 DFFB-212ENST00000625756 649 ntTSL 5 BASIC14.51□□□□□ -0.09
RAB3BP20337 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAB3BP20337 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
RAB3BP20337 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RAB3BP20337 AC004817.3-201ENST00000602957 2129 ntBASIC14.51□□□□□ -0.09
RAB3BP20337 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RAB3BP20337 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.51□□□□□ -0.09
RAB3BP20337 AC023157.3-201ENST00000619086 2088 ntBASIC14.51□□□□□ -0.09
RAB3BP20337 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.51□□□□□ -0.09
RAB3BP20337 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.51□□□□□ -0.09
RAB3BP20337 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.51□□□□□ -0.09
RAB3BP20337 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.5□□□□□ -0.09
RAB3BP20337 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RAB3BP20337 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAB3BP20337 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC14.5□□□□□ -0.09
RAB3BP20337 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC14.5□□□□□ -0.09
RAB3BP20337 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RAB3BP20337 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAB3BP20337 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.5□□□□□ -0.09
RAB3BP20337 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14.5□□□□□ -0.09
RAB3BP20337 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RAB3BP20337 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
RAB3BP20337 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
RAB3BP20337 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
RAB3BP20337 TOP3BP1-201ENST00000420768 1380 ntBASIC14.5□□□□□ -0.09
RAB3BP20337 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAB3BP20337 AC069224.1-201ENST00000566372 1715 ntBASIC14.5□□□□□ -0.09
RAB3BP20337 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAB3BP20337 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAB3BP20337 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
RAB3BP20337 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
RAB3BP20337 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAB3BP20337 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RAB3BP20337 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAB3BP20337 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
RAB3BP20337 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC14.5□□□□□ -0.09
RAB3BP20337 RNF152P1-201ENST00000397754 604 ntBASIC14.5□□□□□ -0.09
RAB3BP20337 AL645929.1-201ENST00000420084 975 ntBASIC14.5□□□□□ -0.09
RAB3BP20337 S100A2-206ENST00000497140 697 ntTSL 2 BASIC14.5□□□□□ -0.09
RAB3BP20337 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
RAB3BP20337 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC14.5□□□□□ -0.09
RAB3BP20337 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC14.5□□□□□ -0.09
RAB3BP20337 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC14.5□□□□□ -0.09
RAB3BP20337 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC14.5□□□□□ -0.09
RAB3BP20337 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
RAB3BP20337 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAB3BP20337 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAB3BP20337 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAB3BP20337 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAB3BP20337 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.5□□□□□ -0.09
RAB3BP20337 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAB3BP20337 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAB3BP20337 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAB3BP20337 PC-214ENST00000628663 1470 ntTSL 5 BASIC14.5□□□□□ -0.09
RAB3BP20337 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RAB3BP20337 LCK-206ENST00000373564 2137 ntTSL 5 BASIC14.5□□□□□ -0.09
RAB3BP20337 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAB3BP20337 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RAB3BP20337 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAB3BP20337 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RAB3BP20337 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RAB3BP20337 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC14.49□□□□□ -0.09
RAB3BP20337 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC14.49□□□□□ -0.09
RAB3BP20337 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
RAB3BP20337 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.49□□□□□ -0.09
RAB3BP20337 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.49□□□□□ -0.09
RAB3BP20337 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms