Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC16.79■□□□□ 0.28
NFKB1P19838 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
NFKB1P19838 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
NFKB1P19838 AC068137.2-201ENST00000605408 478 ntBASIC16.79■□□□□ 0.28
NFKB1P19838 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.79■□□□□ 0.28
NFKB1P19838 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
NFKB1P19838 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NFKB1P19838 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NFKB1P19838 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.79■□□□□ 0.28
NFKB1P19838 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NFKB1P19838 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.79■□□□□ 0.28
NFKB1P19838 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NFKB1P19838 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
NFKB1P19838 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NFKB1P19838 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NFKB1P19838 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NFKB1P19838 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.79■□□□□ 0.28
NFKB1P19838 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NFKB1P19838 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NFKB1P19838 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
NFKB1P19838 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.79■□□□□ 0.28
NFKB1P19838 AL596087.1-201ENST00000400979 1969 ntBASIC16.78■□□□□ 0.28
NFKB1P19838 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NFKB1P19838 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
NFKB1P19838 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
NFKB1P19838 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
NFKB1P19838 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC16.78■□□□□ 0.28
NFKB1P19838 PCDHA1-201ENST00000378133 2726 ntBASIC16.78■□□□□ 0.28
NFKB1P19838 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
NFKB1P19838 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.78■□□□□ 0.28
NFKB1P19838 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
NFKB1P19838 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NFKB1P19838 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.78■□□□□ 0.28
NFKB1P19838 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
NFKB1P19838 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NFKB1P19838 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NFKB1P19838 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
NFKB1P19838 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
NFKB1P19838 AC092474.2-201ENST00000424288 719 ntBASIC16.78■□□□□ 0.28
NFKB1P19838 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
NFKB1P19838 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC16.78■□□□□ 0.28
NFKB1P19838 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.78■□□□□ 0.28
NFKB1P19838 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
NFKB1P19838 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.78■□□□□ 0.28
NFKB1P19838 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC16.78■□□□□ 0.28
NFKB1P19838 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC16.78■□□□□ 0.28
NFKB1P19838 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
NFKB1P19838 AC074386.1-202ENST00000463561 864 ntBASIC16.78■□□□□ 0.28
NFKB1P19838 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
NFKB1P19838 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NFKB1P19838 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC16.78■□□□□ 0.28
NFKB1P19838 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.78■□□□□ 0.28
NFKB1P19838 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NFKB1P19838 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
NFKB1P19838 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NFKB1P19838 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NFKB1P19838 LINC02199-201ENST00000506655 2702 ntBASIC16.78■□□□□ 0.28
NFKB1P19838 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NFKB1P19838 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
NFKB1P19838 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.78■□□□□ 0.28
NFKB1P19838 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NFKB1P19838 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
NFKB1P19838 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
NFKB1P19838 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.78■□□□□ 0.28
NFKB1P19838 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
NFKB1P19838 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NFKB1P19838 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NFKB1P19838 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.78■□□□□ 0.28
NFKB1P19838 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
NFKB1P19838 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.78■□□□□ 0.28
NFKB1P19838 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.78■□□□□ 0.28
NFKB1P19838 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
NFKB1P19838 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NFKB1P19838 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.77■□□□□ 0.28
NFKB1P19838 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
NFKB1P19838 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NFKB1P19838 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
NFKB1P19838 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
NFKB1P19838 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.77■□□□□ 0.28
NFKB1P19838 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC16.77■□□□□ 0.28
NFKB1P19838 REM2-202ENST00000536884 1331 ntTSL 2 BASIC16.77■□□□□ 0.28
NFKB1P19838 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.77■□□□□ 0.28
NFKB1P19838 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
NFKB1P19838 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NFKB1P19838 AC005622.1-201ENST00000636801 1703 ntBASIC16.77■□□□□ 0.28
NFKB1P19838 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
NFKB1P19838 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
NFKB1P19838 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NFKB1P19838 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NFKB1P19838 MIR940-201ENST00000401276 94 ntBASIC16.77■□□□□ 0.28
NFKB1P19838 HNRNPA1P28-201ENST00000424481 961 ntBASIC16.77■□□□□ 0.28
NFKB1P19838 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.77■□□□□ 0.28
NFKB1P19838 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
NFKB1P19838 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC16.77■□□□□ 0.28
NFKB1P19838 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
NFKB1P19838 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
NFKB1P19838 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
NFKB1P19838 AC016027.1-202ENST00000607927 1699 ntBASIC16.77■□□□□ 0.28
NFKB1P19838 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
NFKB1P19838 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC16.77■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms