Protein–RNA interactions for Protein: P19256

CD58, Lymphocyte function-associated antigen 3, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD58P19256 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.72■□□□□ 0.43
CD58P19256 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17.72■□□□□ 0.43
CD58P19256 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CD58P19256 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CD58P19256 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CD58P19256 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
CD58P19256 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CD58P19256 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CD58P19256 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CD58P19256 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CD58P19256 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CD58P19256 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CD58P19256 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.72■□□□□ 0.43
CD58P19256 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CD58P19256 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CD58P19256 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CD58P19256 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.71■□□□□ 0.43
CD58P19256 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CD58P19256 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CD58P19256 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.71■□□□□ 0.43
CD58P19256 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CD58P19256 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CD58P19256 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CD58P19256 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CD58P19256 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CD58P19256 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CD58P19256 AC112482.1-201ENST00000492080 688 ntBASIC17.71■□□□□ 0.43
CD58P19256 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.71■□□□□ 0.43
CD58P19256 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CD58P19256 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17.71■□□□□ 0.43
CD58P19256 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
CD58P19256 MIR3687-2-201ENST00000577708 61 ntBASIC17.71■□□□□ 0.43
CD58P19256 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC17.71■□□□□ 0.43
CD58P19256 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC17.71■□□□□ 0.43
CD58P19256 MIR3687-1-201ENST00000614492 61 ntBASIC17.71■□□□□ 0.43
CD58P19256 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CD58P19256 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CD58P19256 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CD58P19256 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.71■□□□□ 0.43
CD58P19256 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
CD58P19256 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CD58P19256 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CD58P19256 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CD58P19256 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CD58P19256 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.71■□□□□ 0.43
CD58P19256 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CD58P19256 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CD58P19256 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CD58P19256 WASH6P-202ENST00000359512 1437 ntBASIC17.71■□□□□ 0.43
CD58P19256 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CD58P19256 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CD58P19256 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CD58P19256 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CD58P19256 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CD58P19256 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CD58P19256 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CD58P19256 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
CD58P19256 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CD58P19256 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CD58P19256 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CD58P19256 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CD58P19256 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CD58P19256 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.7■□□□□ 0.42
CD58P19256 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CD58P19256 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CD58P19256 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CD58P19256 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CD58P19256 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CD58P19256 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CD58P19256 RPSAP43-201ENST00000402237 625 ntBASIC17.7■□□□□ 0.42
CD58P19256 AL355306.1-201ENST00000415580 579 ntBASIC17.7■□□□□ 0.42
CD58P19256 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC17.7■□□□□ 0.42
CD58P19256 AL671277.1-201ENST00000429656 993 ntBASIC17.7■□□□□ 0.42
CD58P19256 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CD58P19256 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
CD58P19256 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.7■□□□□ 0.42
CD58P19256 AC005829.1-201ENST00000570002 483 ntBASIC17.7■□□□□ 0.42
CD58P19256 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC17.7■□□□□ 0.42
CD58P19256 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC17.7■□□□□ 0.42
CD58P19256 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.7■□□□□ 0.42
CD58P19256 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC17.7■□□□□ 0.42
CD58P19256 CITED2-204ENST00000618718 901 ntTSL 2 BASIC17.7■□□□□ 0.42
CD58P19256 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CD58P19256 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC17.7■□□□□ 0.42
CD58P19256 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CD58P19256 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
CD58P19256 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CD58P19256 DOC2GP-204ENST00000639052 2548 ntBASIC17.7■□□□□ 0.42
CD58P19256 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CD58P19256 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CD58P19256 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CD58P19256 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CD58P19256 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CD58P19256 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CD58P19256 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CD58P19256 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.7■□□□□ 0.42
CD58P19256 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.7■□□□□ 0.42
CD58P19256 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CD58P19256 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
CD58P19256 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms