Protein–RNA interactions for Protein: P10827

THRA, Thyroid hormone receptor alpha, humanhuman

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP10827 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.62■□□□□ 0.25
THRAP10827 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
THRAP10827 AC005829.1-201ENST00000570002 483 ntBASIC16.62■□□□□ 0.25
THRAP10827 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
THRAP10827 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC16.62■□□□□ 0.25
THRAP10827 AL513190.1-201ENST00000621254 727 ntBASIC16.62■□□□□ 0.25
THRAP10827 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
THRAP10827 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
THRAP10827 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
THRAP10827 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.62■□□□□ 0.25
THRAP10827 AC132872.4-202ENST00000622924 2756 ntBASIC16.62■□□□□ 0.25
THRAP10827 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.62■□□□□ 0.25
THRAP10827 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
THRAP10827 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
THRAP10827 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
THRAP10827 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
THRAP10827 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
THRAP10827 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
THRAP10827 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
THRAP10827 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
THRAP10827 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.61■□□□□ 0.25
THRAP10827 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.61■□□□□ 0.25
THRAP10827 HLA-A-202ENST00000376806 1854 ntBASIC16.61■□□□□ 0.25
THRAP10827 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
THRAP10827 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC16.61■□□□□ 0.25
THRAP10827 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.61■□□□□ 0.25
THRAP10827 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
THRAP10827 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.61■□□□□ 0.25
THRAP10827 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
THRAP10827 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
THRAP10827 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.61■□□□□ 0.25
THRAP10827 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
THRAP10827 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
THRAP10827 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
THRAP10827 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.61■□□□□ 0.25
THRAP10827 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.61■□□□□ 0.25
THRAP10827 OR7E47P-204ENST00000575924 449 ntBASIC16.61■□□□□ 0.25
THRAP10827 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC16.61■□□□□ 0.25
THRAP10827 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.61■□□□□ 0.25
THRAP10827 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
THRAP10827 AC010507.1-201ENST00000633895 436 ntBASIC16.61■□□□□ 0.25
THRAP10827 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.61■□□□□ 0.25
THRAP10827 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
THRAP10827 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
THRAP10827 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
THRAP10827 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
THRAP10827 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.61■□□□□ 0.25
THRAP10827 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
THRAP10827 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
THRAP10827 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.61■□□□□ 0.25
THRAP10827 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
THRAP10827 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
THRAP10827 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.61■□□□□ 0.25
THRAP10827 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
THRAP10827 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
THRAP10827 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
THRAP10827 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
THRAP10827 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
THRAP10827 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
THRAP10827 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC16.6■□□□□ 0.25
THRAP10827 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
THRAP10827 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.6■□□□□ 0.25
THRAP10827 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
THRAP10827 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
THRAP10827 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
THRAP10827 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
THRAP10827 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.6■□□□□ 0.25
THRAP10827 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
THRAP10827 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
THRAP10827 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
THRAP10827 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC16.6■□□□□ 0.25
THRAP10827 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.6■□□□□ 0.25
THRAP10827 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
THRAP10827 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
THRAP10827 PMS2P2-201ENST00000425039 1128 ntBASIC16.6■□□□□ 0.25
THRAP10827 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC16.6■□□□□ 0.25
THRAP10827 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC16.6■□□□□ 0.25
THRAP10827 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC16.6■□□□□ 0.25
THRAP10827 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC16.6■□□□□ 0.25
THRAP10827 AC096734.2-201ENST00000562054 433 ntBASIC16.6■□□□□ 0.25
THRAP10827 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC16.6■□□□□ 0.25
THRAP10827 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC16.6■□□□□ 0.25
THRAP10827 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
THRAP10827 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.6■□□□□ 0.25
THRAP10827 C20orf181-201ENST00000623918 480 ntBASIC16.6■□□□□ 0.25
THRAP10827 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
THRAP10827 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
THRAP10827 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC16.6■□□□□ 0.25
THRAP10827 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
THRAP10827 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
THRAP10827 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
THRAP10827 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.6■□□□□ 0.25
THRAP10827 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
THRAP10827 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
THRAP10827 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
THRAP10827 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
THRAP10827 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
THRAP10827 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
THRAP10827 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
THRAP10827 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms