Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CD28P10747 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CD28P10747 RAC2-204ENST00000406508 893 ntTSL 5 BASIC12.9□□□□□ -0.34
CD28P10747 AC142381.1-201ENST00000426099 345 ntBASIC12.9□□□□□ -0.34
CD28P10747 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC12.9□□□□□ -0.34
CD28P10747 WDR53-204ENST00000433160 887 ntTSL 5 BASIC12.9□□□□□ -0.34
CD28P10747 OARD1-208ENST00000469104 704 ntTSL 2 BASIC12.9□□□□□ -0.34
CD28P10747 TAF8-206ENST00000472818 719 ntTSL 2 BASIC12.9□□□□□ -0.34
CD28P10747 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC12.9□□□□□ -0.34
CD28P10747 TERF1P3-201ENST00000505638 1227 ntBASIC12.9□□□□□ -0.34
CD28P10747 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CD28P10747 PRYP6-201ENST00000514804 343 ntBASIC12.9□□□□□ -0.34
CD28P10747 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CD28P10747 AC124947.2-201ENST00000547118 1133 ntBASIC12.9□□□□□ -0.34
CD28P10747 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC12.9□□□□□ -0.34
CD28P10747 RARRES2P9-201ENST00000565168 469 ntBASIC12.9□□□□□ -0.34
CD28P10747 RN7SL204P-201ENST00000582831 262 ntBASIC12.9□□□□□ -0.34
CD28P10747 AC018529.1-201ENST00000613063 361 ntBASIC12.9□□□□□ -0.34
CD28P10747 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC12.9□□□□□ -0.34
CD28P10747 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
CD28P10747 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC12.9□□□□□ -0.34
CD28P10747 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CD28P10747 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC12.9□□□□□ -0.34
CD28P10747 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC12.9□□□□□ -0.34
CD28P10747 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
CD28P10747 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CD28P10747 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC12.9□□□□□ -0.34
CD28P10747 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
CD28P10747 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
CD28P10747 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC12.9□□□□□ -0.34
CD28P10747 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CD28P10747 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CD28P10747 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC12.9□□□□□ -0.34
CD28P10747 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
CD28P10747 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
CD28P10747 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
CD28P10747 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.35
CD28P10747 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CD28P10747 AC092068.3-201ENST00000587894 2016 ntBASIC12.89□□□□□ -0.35
CD28P10747 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CD28P10747 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC12.89□□□□□ -0.35
CD28P10747 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC12.89□□□□□ -0.35
CD28P10747 AL671710.1-201ENST00000610245 2349 ntBASIC12.89□□□□□ -0.35
CD28P10747 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC12.89□□□□□ -0.35
CD28P10747 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CD28P10747 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CD28P10747 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC12.89□□□□□ -0.35
CD28P10747 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CD28P10747 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CD28P10747 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CD28P10747 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC12.89□□□□□ -0.35
CD28P10747 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC12.89□□□□□ -0.35
CD28P10747 MIR661-201ENST00000384842 89 ntBASIC12.89□□□□□ -0.35
CD28P10747 PP14571-201ENST00000404327 934 ntTSL 2 BASIC12.89□□□□□ -0.35
CD28P10747 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC12.89□□□□□ -0.35
CD28P10747 AC092580.3-201ENST00000430932 139 ntBASIC12.89□□□□□ -0.35
CD28P10747 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CD28P10747 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CD28P10747 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CD28P10747 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC12.89□□□□□ -0.35
CD28P10747 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC12.89□□□□□ -0.35
CD28P10747 CFL1-212ENST00000531413 636 ntTSL 3 BASIC12.89□□□□□ -0.35
CD28P10747 POLD4-211ENST00000539074 714 ntTSL 3 BASIC12.89□□□□□ -0.35
CD28P10747 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC12.89□□□□□ -0.35
CD28P10747 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC12.89□□□□□ -0.35
CD28P10747 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC12.89□□□□□ -0.35
CD28P10747 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC12.89□□□□□ -0.35
CD28P10747 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC12.89□□□□□ -0.35
CD28P10747 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC12.89□□□□□ -0.35
CD28P10747 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
CD28P10747 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
CD28P10747 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CD28P10747 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CD28P10747 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CD28P10747 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
CD28P10747 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CD28P10747 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
CD28P10747 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC12.89□□□□□ -0.35
CD28P10747 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CD28P10747 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC12.89□□□□□ -0.35
CD28P10747 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CD28P10747 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CD28P10747 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
CD28P10747 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC12.88□□□□□ -0.35
CD28P10747 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CD28P10747 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CD28P10747 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
CD28P10747 AC009053.2-201ENST00000563701 2365 ntBASIC12.88□□□□□ -0.35
CD28P10747 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CD28P10747 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CD28P10747 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC12.88□□□□□ -0.35
CD28P10747 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CD28P10747 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC12.88□□□□□ -0.35
CD28P10747 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CD28P10747 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CD28P10747 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
CD28P10747 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CD28P10747 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC12.88□□□□□ -0.35
CD28P10747 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CD28P10747 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms