Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
ERCC1P07992 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ERCC1P07992 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC14.7□□□□□ -0.06
ERCC1P07992 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
ERCC1P07992 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ERCC1P07992 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC14.7□□□□□ -0.06
ERCC1P07992 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ERCC1P07992 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
ERCC1P07992 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
ERCC1P07992 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ERCC1P07992 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
ERCC1P07992 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ERCC1P07992 AC006504.4-201ENST00000592118 1568 ntBASIC14.7□□□□□ -0.06
ERCC1P07992 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC14.7□□□□□ -0.06
ERCC1P07992 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC14.7□□□□□ -0.06
ERCC1P07992 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
ERCC1P07992 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
ERCC1P07992 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
ERCC1P07992 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
ERCC1P07992 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
ERCC1P07992 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
ERCC1P07992 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC14.7□□□□□ -0.06
ERCC1P07992 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC14.7□□□□□ -0.06
ERCC1P07992 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC14.7□□□□□ -0.06
ERCC1P07992 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC14.7□□□□□ -0.06
ERCC1P07992 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
ERCC1P07992 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC14.7□□□□□ -0.06
ERCC1P07992 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC14.7□□□□□ -0.06
ERCC1P07992 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
ERCC1P07992 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC14.7□□□□□ -0.06
ERCC1P07992 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC14.7□□□□□ -0.06
ERCC1P07992 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
ERCC1P07992 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
ERCC1P07992 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC14.7□□□□□ -0.06
ERCC1P07992 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ERCC1P07992 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
ERCC1P07992 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ERCC1P07992 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
ERCC1P07992 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ERCC1P07992 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.7□□□□□ -0.06
ERCC1P07992 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC14.7□□□□□ -0.06
ERCC1P07992 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC14.7□□□□□ -0.06
ERCC1P07992 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
ERCC1P07992 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC14.69□□□□□ -0.06
ERCC1P07992 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ERCC1P07992 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ERCC1P07992 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ERCC1P07992 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
ERCC1P07992 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
ERCC1P07992 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
ERCC1P07992 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
ERCC1P07992 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC14.69□□□□□ -0.06
ERCC1P07992 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
ERCC1P07992 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ERCC1P07992 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
ERCC1P07992 AC007967.2-201ENST00000432613 625 ntBASIC14.69□□□□□ -0.06
ERCC1P07992 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC14.69□□□□□ -0.06
ERCC1P07992 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC14.69□□□□□ -0.06
ERCC1P07992 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC14.69□□□□□ -0.06
ERCC1P07992 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC14.69□□□□□ -0.06
ERCC1P07992 AC064836.3-201ENST00000607928 673 ntBASIC14.69□□□□□ -0.06
ERCC1P07992 AC079781.4-201ENST00000641908 219 ntBASIC14.69□□□□□ -0.06
ERCC1P07992 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC14.69□□□□□ -0.06
ERCC1P07992 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC14.69□□□□□ -0.06
ERCC1P07992 AL645728.1-201ENST00000366221 2101 ntBASIC14.69□□□□□ -0.06
ERCC1P07992 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
ERCC1P07992 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
ERCC1P07992 LINC00895-201ENST00000629028 1637 ntBASIC14.69□□□□□ -0.06
ERCC1P07992 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
ERCC1P07992 HYMAI-201ENST00000635591 3347 ntBASIC14.69□□□□□ -0.06
ERCC1P07992 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ERCC1P07992 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
ERCC1P07992 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC14.69□□□□□ -0.06
ERCC1P07992 MYB-242ENST00000618728 3545 ntTSL 5 BASIC14.69□□□□□ -0.06
ERCC1P07992 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC14.68□□□□□ -0.06
ERCC1P07992 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
ERCC1P07992 TSPY26P-202ENST00000565928 3884 ntBASIC14.68□□□□□ -0.06
ERCC1P07992 NORAD-201ENST00000565493 5339 ntBASIC14.68□□□□□ -0.06
ERCC1P07992 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC14.68□□□□□ -0.06
ERCC1P07992 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ERCC1P07992 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ERCC1P07992 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC14.68□□□□□ -0.06
ERCC1P07992 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ERCC1P07992 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ERCC1P07992 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
ERCC1P07992 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
ERCC1P07992 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
ERCC1P07992 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
ERCC1P07992 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
ERCC1P07992 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
ERCC1P07992 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ERCC1P07992 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
ERCC1P07992 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
ERCC1P07992 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC14.68□□□□□ -0.06
ERCC1P07992 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC14.68□□□□□ -0.06
ERCC1P07992 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC14.68□□□□□ -0.06
ERCC1P07992 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
ERCC1P07992 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
ERCC1P07992 IGHV3-65-201ENST00000523210 341 ntBASIC14.68□□□□□ -0.06
ERCC1P07992 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms