Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CAPN1P07384 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CAPN1P07384 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CAPN1P07384 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CAPN1P07384 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CAPN1P07384 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CAPN1P07384 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CAPN1P07384 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CAPN1P07384 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.3■□□□□ 0.2
CAPN1P07384 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CAPN1P07384 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.3■□□□□ 0.2
CAPN1P07384 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CAPN1P07384 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CAPN1P07384 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CAPN1P07384 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CAPN1P07384 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CAPN1P07384 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CAPN1P07384 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.3■□□□□ 0.2
CAPN1P07384 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CAPN1P07384 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CAPN1P07384 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CAPN1P07384 ME2P1-201ENST00000426028 1970 ntBASIC16.29■□□□□ 0.2
CAPN1P07384 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CAPN1P07384 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.29■□□□□ 0.2
CAPN1P07384 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.29■□□□□ 0.2
CAPN1P07384 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.29■□□□□ 0.2
CAPN1P07384 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CAPN1P07384 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CAPN1P07384 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CAPN1P07384 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CAPN1P07384 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CAPN1P07384 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CAPN1P07384 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CAPN1P07384 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CAPN1P07384 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CAPN1P07384 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC16.29■□□□□ 0.2
CAPN1P07384 AC010654.1-201ENST00000615722 808 ntBASIC16.29■□□□□ 0.2
CAPN1P07384 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
CAPN1P07384 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC16.29■□□□□ 0.2
CAPN1P07384 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.29■□□□□ 0.2
CAPN1P07384 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CAPN1P07384 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CAPN1P07384 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CAPN1P07384 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CAPN1P07384 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.29■□□□□ 0.2
CAPN1P07384 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CAPN1P07384 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CAPN1P07384 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.29■□□□□ 0.2
CAPN1P07384 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CAPN1P07384 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.28■□□□□ 0.2
CAPN1P07384 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
CAPN1P07384 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CAPN1P07384 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CAPN1P07384 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CAPN1P07384 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CAPN1P07384 AC002310.6-201ENST00000624451 1377 ntBASIC16.28■□□□□ 0.2
CAPN1P07384 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.28■□□□□ 0.2
CAPN1P07384 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CAPN1P07384 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
CAPN1P07384 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CAPN1P07384 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CAPN1P07384 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
CAPN1P07384 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
CAPN1P07384 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CAPN1P07384 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CAPN1P07384 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
CAPN1P07384 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CAPN1P07384 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CAPN1P07384 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CAPN1P07384 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC16.28■□□□□ 0.2
CAPN1P07384 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
CAPN1P07384 MRPL20P1-201ENST00000400819 433 ntBASIC16.28■□□□□ 0.2
CAPN1P07384 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC16.28■□□□□ 0.2
CAPN1P07384 COA5-202ENST00000409997 557 ntTSL 4 BASIC16.28■□□□□ 0.2
CAPN1P07384 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CAPN1P07384 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.28■□□□□ 0.2
CAPN1P07384 AC087163.2-201ENST00000457299 853 ntBASIC16.28■□□□□ 0.2
CAPN1P07384 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.28■□□□□ 0.2
CAPN1P07384 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CAPN1P07384 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.28■□□□□ 0.2
CAPN1P07384 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.28■□□□□ 0.2
CAPN1P07384 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CAPN1P07384 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC16.28■□□□□ 0.2
CAPN1P07384 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CAPN1P07384 AP001160.2-201ENST00000596071 487 ntBASIC16.28■□□□□ 0.2
CAPN1P07384 AL513190.1-201ENST00000621254 727 ntBASIC16.28■□□□□ 0.2
CAPN1P07384 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.28■□□□□ 0.2
CAPN1P07384 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CAPN1P07384 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CAPN1P07384 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.28■□□□□ 0.2
CAPN1P07384 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
CAPN1P07384 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CAPN1P07384 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CAPN1P07384 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
CAPN1P07384 PI4KAP1-204ENST00000612579 1703 ntBASIC16.28■□□□□ 0.2
CAPN1P07384 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CAPN1P07384 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.28■□□□□ 0.2
CAPN1P07384 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CAPN1P07384 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.27■□□□□ 0.2
CAPN1P07384 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms