Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
MT-ND3P03897 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
MT-ND3P03897 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
MT-ND3P03897 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
MT-ND3P03897 ZNF259P1-201ENST00000407656 1365 ntBASIC16.89■□□□□ 0.29
MT-ND3P03897 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
MT-ND3P03897 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
MT-ND3P03897 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
MT-ND3P03897 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
MT-ND3P03897 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
MT-ND3P03897 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
MT-ND3P03897 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.88■□□□□ 0.29
MT-ND3P03897 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
MT-ND3P03897 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MT-ND3P03897 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
MT-ND3P03897 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.88■□□□□ 0.29
MT-ND3P03897 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
MT-ND3P03897 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
MT-ND3P03897 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MT-ND3P03897 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MT-ND3P03897 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MT-ND3P03897 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
MT-ND3P03897 MIR574-201ENST00000385209 96 ntBASIC16.88■□□□□ 0.29
MT-ND3P03897 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
MT-ND3P03897 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC16.88■□□□□ 0.29
MT-ND3P03897 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC16.88■□□□□ 0.29
MT-ND3P03897 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.88■□□□□ 0.29
MT-ND3P03897 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
MT-ND3P03897 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
MT-ND3P03897 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC16.88■□□□□ 0.29
MT-ND3P03897 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC16.88■□□□□ 0.29
MT-ND3P03897 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC16.88■□□□□ 0.29
MT-ND3P03897 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC16.88■□□□□ 0.29
MT-ND3P03897 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC16.88■□□□□ 0.29
MT-ND3P03897 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC16.88■□□□□ 0.29
MT-ND3P03897 CAND2-206ENST00000626378 333 ntTSL 5 BASIC16.88■□□□□ 0.29
MT-ND3P03897 FAM215A-202ENST00000632077 792 ntBASIC16.88■□□□□ 0.29
MT-ND3P03897 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
MT-ND3P03897 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.88■□□□□ 0.29
MT-ND3P03897 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MT-ND3P03897 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
MT-ND3P03897 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.88■□□□□ 0.29
MT-ND3P03897 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MT-ND3P03897 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
MT-ND3P03897 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MT-ND3P03897 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MT-ND3P03897 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
MT-ND3P03897 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
MT-ND3P03897 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
MT-ND3P03897 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
MT-ND3P03897 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
MT-ND3P03897 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
MT-ND3P03897 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
MT-ND3P03897 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.87■□□□□ 0.29
MT-ND3P03897 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
MT-ND3P03897 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.87■□□□□ 0.29
MT-ND3P03897 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
MT-ND3P03897 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
MT-ND3P03897 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
MT-ND3P03897 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.87■□□□□ 0.29
MT-ND3P03897 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC16.87■□□□□ 0.29
MT-ND3P03897 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.87■□□□□ 0.29
MT-ND3P03897 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.87■□□□□ 0.29
MT-ND3P03897 AC106730.1-201ENST00000566722 1090 ntBASIC16.87■□□□□ 0.29
MT-ND3P03897 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC16.87■□□□□ 0.29
MT-ND3P03897 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
MT-ND3P03897 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.87■□□□□ 0.29
MT-ND3P03897 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
MT-ND3P03897 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
MT-ND3P03897 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
MT-ND3P03897 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
MT-ND3P03897 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.87■□□□□ 0.29
MT-ND3P03897 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
MT-ND3P03897 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
MT-ND3P03897 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
MT-ND3P03897 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
MT-ND3P03897 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
MT-ND3P03897 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
MT-ND3P03897 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
MT-ND3P03897 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.87■□□□□ 0.29
MT-ND3P03897 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
MT-ND3P03897 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
MT-ND3P03897 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
MT-ND3P03897 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
MT-ND3P03897 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.86■□□□□ 0.29
MT-ND3P03897 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.86■□□□□ 0.29
MT-ND3P03897 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
MT-ND3P03897 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
MT-ND3P03897 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
MT-ND3P03897 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
MT-ND3P03897 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
MT-ND3P03897 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
MT-ND3P03897 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
MT-ND3P03897 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
MT-ND3P03897 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
MT-ND3P03897 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
MT-ND3P03897 GGT3P-204ENST00000453783 1664 ntBASIC16.86■□□□□ 0.29
MT-ND3P03897 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.86■□□□□ 0.29
MT-ND3P03897 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
MT-ND3P03897 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms