Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 AC009542.2-202ENST00000619004 1067 ntBASIC18.57■□□□□ 0.56
ALDH1A1P00352 HADH-212ENST00000638621 741 ntTSL 5 BASIC18.57■□□□□ 0.56
ALDH1A1P00352 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
ALDH1A1P00352 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
ALDH1A1P00352 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.57■□□□□ 0.56
ALDH1A1P00352 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ALDH1A1P00352 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ALDH1A1P00352 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ALDH1A1P00352 LINC02012-201ENST00000608206 1725 ntBASIC18.57■□□□□ 0.56
ALDH1A1P00352 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
ALDH1A1P00352 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ALDH1A1P00352 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
ALDH1A1P00352 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
ALDH1A1P00352 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ALDH1A1P00352 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ALDH1A1P00352 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
ALDH1A1P00352 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ALDH1A1P00352 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC18.56■□□□□ 0.56
ALDH1A1P00352 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
ALDH1A1P00352 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
ALDH1A1P00352 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.56■□□□□ 0.56
ALDH1A1P00352 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ALDH1A1P00352 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ALDH1A1P00352 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
ALDH1A1P00352 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ALDH1A1P00352 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ALDH1A1P00352 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ALDH1A1P00352 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
ALDH1A1P00352 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC18.56■□□□□ 0.56
ALDH1A1P00352 FTH1P14-201ENST00000482930 551 ntBASIC18.56■□□□□ 0.56
ALDH1A1P00352 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC18.56■□□□□ 0.56
ALDH1A1P00352 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ALDH1A1P00352 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC18.56■□□□□ 0.56
ALDH1A1P00352 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC18.56■□□□□ 0.56
ALDH1A1P00352 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC18.56■□□□□ 0.56
ALDH1A1P00352 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC18.56■□□□□ 0.56
ALDH1A1P00352 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC18.56■□□□□ 0.56
ALDH1A1P00352 AC008687.7-202ENST00000637404 953 ntBASIC18.56■□□□□ 0.56
ALDH1A1P00352 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC18.56■□□□□ 0.56
ALDH1A1P00352 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ALDH1A1P00352 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ALDH1A1P00352 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ALDH1A1P00352 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.56■□□□□ 0.56
ALDH1A1P00352 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ALDH1A1P00352 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
ALDH1A1P00352 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
ALDH1A1P00352 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
ALDH1A1P00352 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.55■□□□□ 0.56
ALDH1A1P00352 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC18.55■□□□□ 0.56
ALDH1A1P00352 AL138688.1-201ENST00000624851 1594 ntBASIC18.55■□□□□ 0.56
ALDH1A1P00352 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ALDH1A1P00352 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
ALDH1A1P00352 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
ALDH1A1P00352 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ALDH1A1P00352 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ALDH1A1P00352 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.55■□□□□ 0.56
ALDH1A1P00352 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ALDH1A1P00352 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ALDH1A1P00352 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ALDH1A1P00352 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ALDH1A1P00352 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ALDH1A1P00352 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC18.55■□□□□ 0.56
ALDH1A1P00352 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
ALDH1A1P00352 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC18.55■□□□□ 0.56
ALDH1A1P00352 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC18.55■□□□□ 0.56
ALDH1A1P00352 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC18.55■□□□□ 0.56
ALDH1A1P00352 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC18.55■□□□□ 0.56
ALDH1A1P00352 LINC01115-203ENST00000606068 577 ntBASIC18.55■□□□□ 0.56
ALDH1A1P00352 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
ALDH1A1P00352 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ALDH1A1P00352 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ALDH1A1P00352 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ALDH1A1P00352 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC18.55■□□□□ 0.56
ALDH1A1P00352 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC18.55■□□□□ 0.56
ALDH1A1P00352 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ALDH1A1P00352 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.55■□□□□ 0.56
ALDH1A1P00352 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
ALDH1A1P00352 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ALDH1A1P00352 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ALDH1A1P00352 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
ALDH1A1P00352 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC18.54■□□□□ 0.56
ALDH1A1P00352 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
ALDH1A1P00352 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
ALDH1A1P00352 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC18.54■□□□□ 0.56
ALDH1A1P00352 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
ALDH1A1P00352 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
ALDH1A1P00352 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
ALDH1A1P00352 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC18.54■□□□□ 0.56
ALDH1A1P00352 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
ALDH1A1P00352 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ALDH1A1P00352 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ALDH1A1P00352 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC18.54■□□□□ 0.56
ALDH1A1P00352 IGHJ2P-201ENST00000454480 60 ntBASIC18.54■□□□□ 0.56
ALDH1A1P00352 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC18.54■□□□□ 0.56
ALDH1A1P00352 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
ALDH1A1P00352 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC18.54■□□□□ 0.56
ALDH1A1P00352 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ALDH1A1P00352 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC18.54■□□□□ 0.56
ALDH1A1P00352 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
ALDH1A1P00352 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms