Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLPTM1O96005 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLPTM1O96005 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CLPTM1O96005 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.65■□□□□ 0.1
CLPTM1O96005 MIR600HG-201ENST00000449175 5984 ntBASIC15.65■□□□□ 0.1
CLPTM1O96005 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLPTM1O96005 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CLPTM1O96005 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLPTM1O96005 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLPTM1O96005 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLPTM1O96005 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CLPTM1O96005 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLPTM1O96005 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
CLPTM1O96005 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLPTM1O96005 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CLPTM1O96005 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLPTM1O96005 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC15.65■□□□□ 0.1
CLPTM1O96005 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CLPTM1O96005 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLPTM1O96005 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLPTM1O96005 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC15.65■□□□□ 0.1
CLPTM1O96005 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLPTM1O96005 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CLPTM1O96005 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
CLPTM1O96005 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.65■□□□□ 0.1
CLPTM1O96005 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC15.65■□□□□ 0.1
CLPTM1O96005 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLPTM1O96005 AP003733.1-201ENST00000491725 852 ntBASIC15.65■□□□□ 0.1
CLPTM1O96005 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC15.65■□□□□ 0.1
CLPTM1O96005 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC15.65■□□□□ 0.1
CLPTM1O96005 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC15.65■□□□□ 0.1
CLPTM1O96005 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CLPTM1O96005 TK1-205ENST00000590862 642 ntTSL 3 BASIC15.65■□□□□ 0.1
CLPTM1O96005 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC15.65■□□□□ 0.1
CLPTM1O96005 WDR6-223ENST00000627177 207 ntTSL 2 BASIC15.65■□□□□ 0.1
CLPTM1O96005 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLPTM1O96005 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC15.65■□□□□ 0.1
CLPTM1O96005 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CLPTM1O96005 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CLPTM1O96005 AC106881.1-201ENST00000605849 3329 ntBASIC15.65■□□□□ 0.1
CLPTM1O96005 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLPTM1O96005 GSN-203ENST00000373808 2664 ntTSL 2 BASIC15.65■□□□□ 0.1
CLPTM1O96005 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CLPTM1O96005 GRK6P1-201ENST00000400595 1711 ntBASIC15.65■□□□□ 0.1
CLPTM1O96005 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLPTM1O96005 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC15.65■□□□□ 0.1
CLPTM1O96005 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLPTM1O96005 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CLPTM1O96005 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLPTM1O96005 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
CLPTM1O96005 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
CLPTM1O96005 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
CLPTM1O96005 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.1
CLPTM1O96005 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.1
CLPTM1O96005 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
CLPTM1O96005 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC15.64■□□□□ 0.09
CLPTM1O96005 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLPTM1O96005 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CLPTM1O96005 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLPTM1O96005 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
CLPTM1O96005 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CLPTM1O96005 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CLPTM1O96005 UPK3BP1-201ENST00000428678 509 ntBASIC15.64■□□□□ 0.09
CLPTM1O96005 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CLPTM1O96005 CNP-204ENST00000472031 1019 ntTSL 2 BASIC15.64■□□□□ 0.09
CLPTM1O96005 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC15.64■□□□□ 0.09
CLPTM1O96005 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.64■□□□□ 0.09
CLPTM1O96005 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC15.64■□□□□ 0.09
CLPTM1O96005 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC15.64■□□□□ 0.09
CLPTM1O96005 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC15.64■□□□□ 0.09
CLPTM1O96005 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLPTM1O96005 TEN1-204ENST00000588202 862 ntTSL 3 BASIC15.64■□□□□ 0.09
CLPTM1O96005 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLPTM1O96005 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC15.64■□□□□ 0.09
CLPTM1O96005 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.64■□□□□ 0.09
CLPTM1O96005 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC15.64■□□□□ 0.09
CLPTM1O96005 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLPTM1O96005 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC15.64■□□□□ 0.09
CLPTM1O96005 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLPTM1O96005 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CLPTM1O96005 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC15.64■□□□□ 0.09
CLPTM1O96005 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
CLPTM1O96005 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
CLPTM1O96005 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
CLPTM1O96005 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLPTM1O96005 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLPTM1O96005 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLPTM1O96005 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.64■□□□□ 0.09
CLPTM1O96005 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC15.64■□□□□ 0.09
CLPTM1O96005 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
CLPTM1O96005 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CLPTM1O96005 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CLPTM1O96005 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC15.63■□□□□ 0.09
CLPTM1O96005 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLPTM1O96005 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
CLPTM1O96005 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLPTM1O96005 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLPTM1O96005 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLPTM1O96005 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLPTM1O96005 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms