Protein–RNA interactions for Protein: O95900

TRUB2, Mitochondrial mRNA pseudouridine synthase TRUB2, humanhuman

Known RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2O95900 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
TRUB2O95900 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRUB2O95900 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRUB2O95900 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TRUB2O95900 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRUB2O95900 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.27■□□□□ 0.35
TRUB2O95900 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRUB2O95900 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRUB2O95900 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRUB2O95900 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRUB2O95900 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRUB2O95900 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
TRUB2O95900 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRUB2O95900 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRUB2O95900 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
TRUB2O95900 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRUB2O95900 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC17.26■□□□□ 0.35
TRUB2O95900 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRUB2O95900 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
TRUB2O95900 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRUB2O95900 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRUB2O95900 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC17.26■□□□□ 0.35
TRUB2O95900 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.26■□□□□ 0.35
TRUB2O95900 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRUB2O95900 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRUB2O95900 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
TRUB2O95900 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC17.26■□□□□ 0.35
TRUB2O95900 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRUB2O95900 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRUB2O95900 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC17.26■□□□□ 0.35
TRUB2O95900 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC17.26■□□□□ 0.35
TRUB2O95900 POU5F1P6-201ENST00000466990 990 ntBASIC17.26■□□□□ 0.35
TRUB2O95900 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.26■□□□□ 0.35
TRUB2O95900 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC17.26■□□□□ 0.35
TRUB2O95900 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC17.26■□□□□ 0.35
TRUB2O95900 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
TRUB2O95900 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC17.26■□□□□ 0.35
TRUB2O95900 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRUB2O95900 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
TRUB2O95900 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
TRUB2O95900 AC134684.3-201ENST00000641758 218 ntBASIC17.26■□□□□ 0.35
TRUB2O95900 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRUB2O95900 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRUB2O95900 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC17.26■□□□□ 0.35
TRUB2O95900 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.26■□□□□ 0.35
TRUB2O95900 AL513523.2-202ENST00000427283 2040 ntBASIC17.26■□□□□ 0.35
TRUB2O95900 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRUB2O95900 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRUB2O95900 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRUB2O95900 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRUB2O95900 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
TRUB2O95900 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRUB2O95900 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
TRUB2O95900 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRUB2O95900 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
TRUB2O95900 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
TRUB2O95900 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRUB2O95900 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRUB2O95900 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRUB2O95900 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.25■□□□□ 0.35
TRUB2O95900 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC17.25■□□□□ 0.35
TRUB2O95900 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRUB2O95900 BSG-215ENST00000618006 1329 ntTSL 2 BASIC17.25■□□□□ 0.35
TRUB2O95900 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRUB2O95900 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRUB2O95900 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
TRUB2O95900 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRUB2O95900 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRUB2O95900 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRUB2O95900 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRUB2O95900 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRUB2O95900 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRUB2O95900 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRUB2O95900 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.25■□□□□ 0.35
TRUB2O95900 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRUB2O95900 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC17.25■□□□□ 0.35
TRUB2O95900 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRUB2O95900 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRUB2O95900 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRUB2O95900 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRUB2O95900 SPDYE11-202ENST00000450699 704 ntBASIC17.25■□□□□ 0.35
TRUB2O95900 AC004967.1-201ENST00000453589 447 ntBASIC17.25■□□□□ 0.35
TRUB2O95900 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC17.25■□□□□ 0.35
TRUB2O95900 KRT8P48-201ENST00000515599 1220 ntBASIC17.25■□□□□ 0.35
TRUB2O95900 INO80E-210ENST00000567705 880 ntTSL 3 BASIC17.25■□□□□ 0.35
TRUB2O95900 SPDYE9P-201ENST00000570642 692 ntBASIC17.25■□□□□ 0.35
TRUB2O95900 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC17.25■□□□□ 0.35
TRUB2O95900 SPDYE10P-202ENST00000612005 668 ntBASIC17.25■□□□□ 0.35
TRUB2O95900 SPDYE8P-202ENST00000612377 668 ntBASIC17.25■□□□□ 0.35
TRUB2O95900 AC139530.3-201ENST00000620344 690 ntBASIC17.25■□□□□ 0.35
TRUB2O95900 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.25■□□□□ 0.35
TRUB2O95900 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
TRUB2O95900 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRUB2O95900 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.25■□□□□ 0.35
TRUB2O95900 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
TRUB2O95900 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC17.25■□□□□ 0.35
TRUB2O95900 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRUB2O95900 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRUB2O95900 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRUB2O95900 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms