Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC18.34■□□□□ 0.53
CLSTN1O94985 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLSTN1O94985 CD63-210ENST00000550776 870 ntTSL 5 BASIC18.34■□□□□ 0.53
CLSTN1O94985 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC18.34■□□□□ 0.53
CLSTN1O94985 CYB561-216ENST00000582297 897 ntTSL 3 BASIC18.34■□□□□ 0.53
CLSTN1O94985 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC18.34■□□□□ 0.53
CLSTN1O94985 AC008667.4-201ENST00000607370 168 ntBASIC18.34■□□□□ 0.53
CLSTN1O94985 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLSTN1O94985 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLSTN1O94985 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLSTN1O94985 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC18.34■□□□□ 0.53
CLSTN1O94985 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLSTN1O94985 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC18.34■□□□□ 0.53
CLSTN1O94985 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLSTN1O94985 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLSTN1O94985 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CLSTN1O94985 UBALD1-205ENST00000590891 2641 ntBASIC18.34■□□□□ 0.53
CLSTN1O94985 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CLSTN1O94985 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLSTN1O94985 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLSTN1O94985 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLSTN1O94985 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC18.33■□□□□ 0.53
CLSTN1O94985 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CLSTN1O94985 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CLSTN1O94985 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC18.33■□□□□ 0.53
CLSTN1O94985 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CLSTN1O94985 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CLSTN1O94985 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CLSTN1O94985 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
CLSTN1O94985 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CLSTN1O94985 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC18.33■□□□□ 0.53
CLSTN1O94985 ZNF259P1-201ENST00000407656 1365 ntBASIC18.33■□□□□ 0.53
CLSTN1O94985 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
CLSTN1O94985 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CLSTN1O94985 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC18.33■□□□□ 0.53
CLSTN1O94985 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
CLSTN1O94985 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLSTN1O94985 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLSTN1O94985 CRYGEP-201ENST00000412192 528 ntBASIC18.33■□□□□ 0.52
CLSTN1O94985 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC18.33■□□□□ 0.52
CLSTN1O94985 AC007967.2-201ENST00000432613 625 ntBASIC18.33■□□□□ 0.52
CLSTN1O94985 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC18.33■□□□□ 0.52
CLSTN1O94985 RPL13AP23-201ENST00000480739 586 ntBASIC18.33■□□□□ 0.52
CLSTN1O94985 RNA5SP419-201ENST00000515908 135 ntBASIC18.33■□□□□ 0.52
CLSTN1O94985 TERC-201ENST00000602385 541 ntBASIC18.33■□□□□ 0.52
CLSTN1O94985 Z83851.2-201ENST00000609564 659 ntBASIC18.33■□□□□ 0.52
CLSTN1O94985 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLSTN1O94985 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CLSTN1O94985 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLSTN1O94985 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLSTN1O94985 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLSTN1O94985 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CLSTN1O94985 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CLSTN1O94985 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
CLSTN1O94985 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC18.33■□□□□ 0.52
CLSTN1O94985 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLSTN1O94985 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLSTN1O94985 FOS-208ENST00000555686 1496 ntTSL 2 BASIC18.33■□□□□ 0.52
CLSTN1O94985 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLSTN1O94985 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLSTN1O94985 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLSTN1O94985 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLSTN1O94985 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLSTN1O94985 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CLSTN1O94985 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLSTN1O94985 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CLSTN1O94985 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLSTN1O94985 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC18.32■□□□□ 0.52
CLSTN1O94985 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLSTN1O94985 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLSTN1O94985 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC18.32■□□□□ 0.52
CLSTN1O94985 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CLSTN1O94985 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC18.32■□□□□ 0.52
CLSTN1O94985 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLSTN1O94985 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLSTN1O94985 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
CLSTN1O94985 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CLSTN1O94985 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC18.32■□□□□ 0.52
CLSTN1O94985 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
CLSTN1O94985 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC18.32■□□□□ 0.52
CLSTN1O94985 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC18.32■□□□□ 0.52
CLSTN1O94985 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLSTN1O94985 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLSTN1O94985 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CLSTN1O94985 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLSTN1O94985 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLSTN1O94985 AL022342.1-201ENST00000400363 863 ntBASIC18.32■□□□□ 0.52
CLSTN1O94985 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CLSTN1O94985 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC18.32■□□□□ 0.52
CLSTN1O94985 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC18.32■□□□□ 0.52
CLSTN1O94985 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
CLSTN1O94985 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC18.32■□□□□ 0.52
CLSTN1O94985 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC18.32■□□□□ 0.52
CLSTN1O94985 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC18.32■□□□□ 0.52
CLSTN1O94985 SLC25A1P1-201ENST00000528351 927 ntBASIC18.32■□□□□ 0.52
CLSTN1O94985 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC18.32■□□□□ 0.52
CLSTN1O94985 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC18.32■□□□□ 0.52
CLSTN1O94985 AF228730.7-201ENST00000641842 219 ntBASIC18.32■□□□□ 0.52
CLSTN1O94985 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CLSTN1O94985 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms