Protein–RNA interactions for Protein: O75909

CCNK, Cyclin-K, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNKO75909 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCNKO75909 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CCNKO75909 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CCNKO75909 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CCNKO75909 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCNKO75909 AC002310.6-201ENST00000624451 1377 ntBASIC14.35□□□□□ -0.11
CCNKO75909 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC14.35□□□□□ -0.11
CCNKO75909 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCNKO75909 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCNKO75909 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCNKO75909 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC14.35□□□□□ -0.11
CCNKO75909 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CCNKO75909 ABR-228ENST00000574437 3196 ntTSL 5 BASIC14.35□□□□□ -0.11
CCNKO75909 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CCNKO75909 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCNKO75909 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CCNKO75909 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCNKO75909 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCNKO75909 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCNKO75909 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCNKO75909 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCNKO75909 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCNKO75909 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CCNKO75909 KRT18P23-201ENST00000435622 1283 ntBASIC14.35□□□□□ -0.11
CCNKO75909 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC14.35□□□□□ -0.11
CCNKO75909 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CCNKO75909 RN7SL471P-201ENST00000580476 299 ntBASIC14.35□□□□□ -0.11
CCNKO75909 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC14.35□□□□□ -0.11
CCNKO75909 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC14.35□□□□□ -0.11
CCNKO75909 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCNKO75909 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCNKO75909 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCNKO75909 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.35□□□□□ -0.11
CCNKO75909 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCNKO75909 AC020658.6-201ENST00000623564 1870 ntBASIC14.35□□□□□ -0.11
CCNKO75909 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCNKO75909 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CCNKO75909 AC138969.2-201ENST00000532739 9932 ntBASIC14.35□□□□□ -0.11
CCNKO75909 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCNKO75909 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCNKO75909 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCNKO75909 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
CCNKO75909 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCNKO75909 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC14.35□□□□□ -0.11
CCNKO75909 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.34□□□□□ -0.11
CCNKO75909 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CCNKO75909 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.34□□□□□ -0.11
CCNKO75909 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCNKO75909 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.34□□□□□ -0.11
CCNKO75909 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCNKO75909 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCNKO75909 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CCNKO75909 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CCNKO75909 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CCNKO75909 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CCNKO75909 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CCNKO75909 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCNKO75909 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC14.34□□□□□ -0.11
CCNKO75909 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CCNKO75909 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
CCNKO75909 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CCNKO75909 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCNKO75909 MFAP1P1-201ENST00000442257 1255 ntBASIC14.34□□□□□ -0.11
CCNKO75909 AL355355.2-201ENST00000442321 338 ntBASIC14.34□□□□□ -0.11
CCNKO75909 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CCNKO75909 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
CCNKO75909 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC14.34□□□□□ -0.11
CCNKO75909 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCNKO75909 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CCNKO75909 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC14.34□□□□□ -0.11
CCNKO75909 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC14.34□□□□□ -0.11
CCNKO75909 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.34□□□□□ -0.11
CCNKO75909 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.34□□□□□ -0.11
CCNKO75909 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCNKO75909 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC14.34□□□□□ -0.11
CCNKO75909 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCNKO75909 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC14.34□□□□□ -0.11
CCNKO75909 C1R-201ENST00000535233 2211 ntTSL 2 BASIC14.34□□□□□ -0.11
CCNKO75909 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
CCNKO75909 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCNKO75909 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC14.34□□□□□ -0.11
CCNKO75909 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CCNKO75909 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCNKO75909 AC096733.2-201ENST00000609937 1394 ntBASIC14.34□□□□□ -0.11
CCNKO75909 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCNKO75909 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCNKO75909 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CCNKO75909 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CCNKO75909 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
CCNKO75909 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CCNKO75909 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CCNKO75909 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CCNKO75909 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
CCNKO75909 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CCNKO75909 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.11
CCNKO75909 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC14.33□□□□□ -0.12
CCNKO75909 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCNKO75909 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CCNKO75909 FRMD8P1-201ENST00000440433 1524 ntBASIC14.33□□□□□ -0.12
CCNKO75909 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms