Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RFPL1O75677 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
RFPL1O75677 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.25
RFPL1O75677 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.58■□□□□ 0.25
RFPL1O75677 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
RFPL1O75677 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RFPL1O75677 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RFPL1O75677 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RFPL1O75677 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
RFPL1O75677 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
RFPL1O75677 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC16.58■□□□□ 0.24
RFPL1O75677 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.58■□□□□ 0.24
RFPL1O75677 KRT18P3-201ENST00000451602 1288 ntBASIC16.58■□□□□ 0.24
RFPL1O75677 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC16.58■□□□□ 0.24
RFPL1O75677 RNA5SP415-201ENST00000517246 115 ntBASIC16.58■□□□□ 0.24
RFPL1O75677 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC16.58■□□□□ 0.24
RFPL1O75677 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.58■□□□□ 0.24
RFPL1O75677 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
RFPL1O75677 AC010654.1-201ENST00000615722 808 ntBASIC16.58■□□□□ 0.24
RFPL1O75677 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.58■□□□□ 0.24
RFPL1O75677 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC16.58■□□□□ 0.24
RFPL1O75677 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
RFPL1O75677 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RFPL1O75677 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.58■□□□□ 0.24
RFPL1O75677 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RFPL1O75677 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC16.58■□□□□ 0.24
RFPL1O75677 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
RFPL1O75677 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.58■□□□□ 0.24
RFPL1O75677 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.58■□□□□ 0.24
RFPL1O75677 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
RFPL1O75677 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RFPL1O75677 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
RFPL1O75677 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RFPL1O75677 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.58■□□□□ 0.24
RFPL1O75677 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RFPL1O75677 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RFPL1O75677 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RFPL1O75677 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.57■□□□□ 0.24
RFPL1O75677 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RFPL1O75677 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.57■□□□□ 0.24
RFPL1O75677 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RFPL1O75677 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RFPL1O75677 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.57■□□□□ 0.24
RFPL1O75677 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RFPL1O75677 CDC14C-201ENST00000428251 1719 ntBASIC16.57■□□□□ 0.24
RFPL1O75677 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
RFPL1O75677 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RFPL1O75677 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RFPL1O75677 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RFPL1O75677 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
RFPL1O75677 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RFPL1O75677 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC16.57■□□□□ 0.24
RFPL1O75677 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RFPL1O75677 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
RFPL1O75677 PTCHD3P3-201ENST00000403073 906 ntBASIC16.57■□□□□ 0.24
RFPL1O75677 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC16.57■□□□□ 0.24
RFPL1O75677 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RFPL1O75677 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC16.57■□□□□ 0.24
RFPL1O75677 DNAJB3-201ENST00000446806 729 ntBASIC16.57■□□□□ 0.24
RFPL1O75677 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RFPL1O75677 SLC25A6P2-201ENST00000497974 877 ntBASIC16.57■□□□□ 0.24
RFPL1O75677 NMU-202ENST00000505262 693 ntTSL 3 BASIC16.57■□□□□ 0.24
RFPL1O75677 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC16.57■□□□□ 0.24
RFPL1O75677 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC16.57■□□□□ 0.24
RFPL1O75677 AC105339.3-201ENST00000560043 636 ntBASIC16.57■□□□□ 0.24
RFPL1O75677 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC16.57■□□□□ 0.24
RFPL1O75677 AC012640.2-201ENST00000561606 901 ntBASIC16.57■□□□□ 0.24
RFPL1O75677 AC040169.1-201ENST00000565382 521 ntBASIC16.57■□□□□ 0.24
RFPL1O75677 MIR3687-2-201ENST00000577708 61 ntBASIC16.57■□□□□ 0.24
RFPL1O75677 AC010327.4-202ENST00000591484 748 ntBASIC16.57■□□□□ 0.24
RFPL1O75677 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RFPL1O75677 CYP2A7P1-201ENST00000595391 815 ntBASIC16.57■□□□□ 0.24
RFPL1O75677 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RFPL1O75677 MIR3687-1-201ENST00000614492 61 ntBASIC16.57■□□□□ 0.24
RFPL1O75677 AC004706.3-202ENST00000621574 984 ntBASIC16.57■□□□□ 0.24
RFPL1O75677 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.57■□□□□ 0.24
RFPL1O75677 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
RFPL1O75677 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RFPL1O75677 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
RFPL1O75677 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.57■□□□□ 0.24
RFPL1O75677 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
RFPL1O75677 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.57■□□□□ 0.24
RFPL1O75677 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
RFPL1O75677 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.57■□□□□ 0.24
RFPL1O75677 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.57■□□□□ 0.24
RFPL1O75677 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RFPL1O75677 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RFPL1O75677 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
RFPL1O75677 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
RFPL1O75677 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
RFPL1O75677 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
RFPL1O75677 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.56■□□□□ 0.24
RFPL1O75677 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
RFPL1O75677 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RFPL1O75677 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.56■□□□□ 0.24
RFPL1O75677 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
RFPL1O75677 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RFPL1O75677 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
RFPL1O75677 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC16.56■□□□□ 0.24
RFPL1O75677 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms