Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 AC009947.1-201ENST00000444350 727 ntBASIC11.85□□□□□ -0.51
PAX4O43316 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC11.85□□□□□ -0.51
PAX4O43316 RPL13AP23-201ENST00000480739 586 ntBASIC11.85□□□□□ -0.51
PAX4O43316 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
PAX4O43316 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC11.85□□□□□ -0.51
PAX4O43316 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC11.85□□□□□ -0.51
PAX4O43316 CD63-204ENST00000546939 779 ntTSL 3 BASIC11.85□□□□□ -0.51
PAX4O43316 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC11.85□□□□□ -0.51
PAX4O43316 DUX4L17-201ENST00000557360 1267 ntBASIC11.85□□□□□ -0.51
PAX4O43316 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC11.85□□□□□ -0.51
PAX4O43316 AC091167.2-201ENST00000579581 588 ntBASIC11.85□□□□□ -0.51
PAX4O43316 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC11.85□□□□□ -0.51
PAX4O43316 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
PAX4O43316 AC120114.3-201ENST00000611923 658 ntBASIC11.85□□□□□ -0.51
PAX4O43316 BSG-214ENST00000614867 960 ntTSL 3 BASIC11.85□□□□□ -0.51
PAX4O43316 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC11.85□□□□□ -0.51
PAX4O43316 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC11.85□□□□□ -0.51
PAX4O43316 CAND2-206ENST00000626378 333 ntTSL 5 BASIC11.85□□□□□ -0.51
PAX4O43316 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC11.85□□□□□ -0.51
PAX4O43316 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
PAX4O43316 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
PAX4O43316 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC11.85□□□□□ -0.51
PAX4O43316 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
PAX4O43316 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
PAX4O43316 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
PAX4O43316 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
PAX4O43316 AC104109.2-201ENST00000602919 1418 ntBASIC11.85□□□□□ -0.51
PAX4O43316 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
PAX4O43316 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
PAX4O43316 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC11.85□□□□□ -0.51
PAX4O43316 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
PAX4O43316 IL9RP2-201ENST00000423948 1312 ntBASIC11.85□□□□□ -0.51
PAX4O43316 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC11.85□□□□□ -0.51
PAX4O43316 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
PAX4O43316 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
PAX4O43316 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
PAX4O43316 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC11.84□□□□□ -0.51
PAX4O43316 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
PAX4O43316 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC11.84□□□□□ -0.51
PAX4O43316 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
PAX4O43316 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
PAX4O43316 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC11.84□□□□□ -0.51
PAX4O43316 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
PAX4O43316 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
PAX4O43316 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC11.84□□□□□ -0.51
PAX4O43316 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC11.84□□□□□ -0.51
PAX4O43316 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
PAX4O43316 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
PAX4O43316 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC11.84□□□□□ -0.51
PAX4O43316 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC11.84□□□□□ -0.51
PAX4O43316 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC11.84□□□□□ -0.51
PAX4O43316 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
PAX4O43316 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
PAX4O43316 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC11.84□□□□□ -0.51
PAX4O43316 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
PAX4O43316 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
PAX4O43316 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC11.84□□□□□ -0.51
PAX4O43316 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
PAX4O43316 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
PAX4O43316 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
PAX4O43316 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
PAX4O43316 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
PAX4O43316 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC11.84□□□□□ -0.51
PAX4O43316 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC11.84□□□□□ -0.51
PAX4O43316 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC11.84□□□□□ -0.51
PAX4O43316 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
PAX4O43316 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC11.84□□□□□ -0.51
PAX4O43316 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC11.84□□□□□ -0.51
PAX4O43316 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC11.84□□□□□ -0.51
PAX4O43316 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC11.84□□□□□ -0.51
PAX4O43316 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC11.84□□□□□ -0.51
PAX4O43316 MPDU1-223ENST00000582151 728 ntBASIC11.84□□□□□ -0.51
PAX4O43316 CYB561-216ENST00000582297 897 ntTSL 3 BASIC11.84□□□□□ -0.51
PAX4O43316 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
PAX4O43316 REXO1L3P-201ENST00000622202 1288 ntBASIC11.84□□□□□ -0.51
PAX4O43316 AC022726.2-201ENST00000634673 547 ntBASIC11.84□□□□□ -0.51
PAX4O43316 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
PAX4O43316 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
PAX4O43316 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC11.84□□□□□ -0.51
PAX4O43316 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
PAX4O43316 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC11.84□□□□□ -0.51
PAX4O43316 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
PAX4O43316 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
PAX4O43316 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
PAX4O43316 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC11.84□□□□□ -0.51
PAX4O43316 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
PAX4O43316 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC11.84□□□□□ -0.51
PAX4O43316 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC11.84□□□□□ -0.51
PAX4O43316 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
PAX4O43316 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
PAX4O43316 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
PAX4O43316 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC11.84□□□□□ -0.51
PAX4O43316 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
PAX4O43316 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
PAX4O43316 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
PAX4O43316 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
PAX4O43316 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
PAX4O43316 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC11.84□□□□□ -0.51
PAX4O43316 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
PAX4O43316 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms