Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.1■□□□□ 0.17
HDAC3O15379 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HDAC3O15379 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.1■□□□□ 0.17
HDAC3O15379 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
HDAC3O15379 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.1■□□□□ 0.17
HDAC3O15379 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HDAC3O15379 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HDAC3O15379 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HDAC3O15379 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.1■□□□□ 0.17
HDAC3O15379 AL353732.1-201ENST00000569618 1459 ntBASIC16.1■□□□□ 0.17
HDAC3O15379 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HDAC3O15379 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HDAC3O15379 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HDAC3O15379 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HDAC3O15379 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
HDAC3O15379 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
HDAC3O15379 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
HDAC3O15379 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.09■□□□□ 0.17
HDAC3O15379 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HDAC3O15379 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.09■□□□□ 0.17
HDAC3O15379 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HDAC3O15379 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
HDAC3O15379 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HDAC3O15379 AC092850.2-201ENST00000623821 2697 ntBASIC16.09■□□□□ 0.17
HDAC3O15379 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
HDAC3O15379 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HDAC3O15379 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
HDAC3O15379 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HDAC3O15379 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC16.09■□□□□ 0.17
HDAC3O15379 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC16.09■□□□□ 0.17
HDAC3O15379 KRT16P4-201ENST00000453883 522 ntBASIC16.09■□□□□ 0.17
HDAC3O15379 AC132008.2-207ENST00000454517 770 ntBASIC16.09■□□□□ 0.17
HDAC3O15379 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HDAC3O15379 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
HDAC3O15379 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HDAC3O15379 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.09■□□□□ 0.17
HDAC3O15379 NKAPP1-205ENST00000585790 367 ntBASIC16.09■□□□□ 0.17
HDAC3O15379 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
HDAC3O15379 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.09■□□□□ 0.17
HDAC3O15379 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.09■□□□□ 0.17
HDAC3O15379 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.09■□□□□ 0.17
HDAC3O15379 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HDAC3O15379 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.09■□□□□ 0.17
HDAC3O15379 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HDAC3O15379 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HDAC3O15379 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.09■□□□□ 0.17
HDAC3O15379 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HDAC3O15379 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.09■□□□□ 0.17
HDAC3O15379 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HDAC3O15379 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.09■□□□□ 0.17
HDAC3O15379 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HDAC3O15379 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.09■□□□□ 0.17
HDAC3O15379 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
HDAC3O15379 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
HDAC3O15379 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
HDAC3O15379 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.08■□□□□ 0.17
HDAC3O15379 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
HDAC3O15379 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
HDAC3O15379 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16.08■□□□□ 0.17
HDAC3O15379 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
HDAC3O15379 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
HDAC3O15379 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.17
HDAC3O15379 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HDAC3O15379 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HDAC3O15379 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HDAC3O15379 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HDAC3O15379 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HDAC3O15379 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
HDAC3O15379 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
HDAC3O15379 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.08■□□□□ 0.16
HDAC3O15379 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC16.08■□□□□ 0.16
HDAC3O15379 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
HDAC3O15379 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
HDAC3O15379 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.08■□□□□ 0.16
HDAC3O15379 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
HDAC3O15379 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC16.08■□□□□ 0.16
HDAC3O15379 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.08■□□□□ 0.16
HDAC3O15379 AP001350.2-201ENST00000625104 1094 ntBASIC16.08■□□□□ 0.16
HDAC3O15379 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
HDAC3O15379 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.08■□□□□ 0.16
HDAC3O15379 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
HDAC3O15379 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16.08■□□□□ 0.16
HDAC3O15379 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
HDAC3O15379 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HDAC3O15379 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
HDAC3O15379 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.08■□□□□ 0.16
HDAC3O15379 AC016027.1-202ENST00000607927 1699 ntBASIC16.08■□□□□ 0.16
HDAC3O15379 PI4KAP1-204ENST00000612579 1703 ntBASIC16.08■□□□□ 0.16
HDAC3O15379 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
HDAC3O15379 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
HDAC3O15379 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
HDAC3O15379 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.07■□□□□ 0.16
HDAC3O15379 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HDAC3O15379 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
HDAC3O15379 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HDAC3O15379 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.07■□□□□ 0.16
HDAC3O15379 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HDAC3O15379 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HDAC3O15379 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
HDAC3O15379 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms