Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC26.05■■□□□ 1.76
CHD1O14646 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
CHD1O14646 SLED1-202ENST00000512051 380 ntBASIC26.05■■□□□ 1.76
CHD1O14646 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
CHD1O14646 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC26.05■■□□□ 1.76
CHD1O14646 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC26.05■■□□□ 1.76
CHD1O14646 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC26.05■■□□□ 1.76
CHD1O14646 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC26.05■■□□□ 1.76
CHD1O14646 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC26.05■■□□□ 1.76
CHD1O14646 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
CHD1O14646 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC26.05■■□□□ 1.76
CHD1O14646 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC26.05■■□□□ 1.76
CHD1O14646 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC26.05■■□□□ 1.76
CHD1O14646 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
CHD1O14646 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC26.05■■□□□ 1.76
CHD1O14646 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
CHD1O14646 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
CHD1O14646 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC26.05■■□□□ 1.76
CHD1O14646 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
CHD1O14646 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC26.05■■□□□ 1.76
CHD1O14646 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC26.05■■□□□ 1.76
CHD1O14646 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC26.05■■□□□ 1.76
CHD1O14646 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC26.05■■□□□ 1.76
CHD1O14646 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC26.05■■□□□ 1.76
CHD1O14646 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC26.05■■□□□ 1.76
CHD1O14646 AC000095.1-201ENST00000603208 874 ntBASIC26.05■■□□□ 1.76
CHD1O14646 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
CHD1O14646 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC26.04■■□□□ 1.76
CHD1O14646 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC26.04■■□□□ 1.76
CHD1O14646 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC26.04■■□□□ 1.76
CHD1O14646 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
CHD1O14646 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
CHD1O14646 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
CHD1O14646 AL138688.1-201ENST00000624851 1594 ntBASIC26.04■■□□□ 1.76
CHD1O14646 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
CHD1O14646 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC26.04■■□□□ 1.76
CHD1O14646 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC26.04■■□□□ 1.76
CHD1O14646 PRKXP1-201ENST00000561423 1122 ntBASIC26.04■■□□□ 1.76
CHD1O14646 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC26.04■■□□□ 1.76
CHD1O14646 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
CHD1O14646 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
CHD1O14646 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC26.04■■□□□ 1.76
CHD1O14646 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
CHD1O14646 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
CHD1O14646 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC26.04■■□□□ 1.76
CHD1O14646 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC26.03■■□□□ 1.76
CHD1O14646 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
CHD1O14646 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC26.03■■□□□ 1.76
CHD1O14646 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
CHD1O14646 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC26.03■■□□□ 1.76
CHD1O14646 AL138709.1-201ENST00000614840 1693 ntBASIC26.03■■□□□ 1.76
CHD1O14646 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
CHD1O14646 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC26.03■■□□□ 1.76
CHD1O14646 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
CHD1O14646 MAGEA5-201ENST00000446757 942 ntBASIC26.03■■□□□ 1.76
CHD1O14646 KRT18P66-201ENST00000452970 1269 ntBASIC26.03■■□□□ 1.76
CHD1O14646 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
CHD1O14646 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
CHD1O14646 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC26.03■■□□□ 1.76
CHD1O14646 AL133499.1-201ENST00000596207 608 ntBASIC26.03■■□□□ 1.76
CHD1O14646 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC26.03■■□□□ 1.76
CHD1O14646 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
CHD1O14646 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC26.03■■□□□ 1.76
CHD1O14646 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
CHD1O14646 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC26.03■■□□□ 1.76
CHD1O14646 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC26.02■■□□□ 1.76
CHD1O14646 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
CHD1O14646 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC26.02■■□□□ 1.76
CHD1O14646 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC26.02■■□□□ 1.76
CHD1O14646 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
CHD1O14646 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
CHD1O14646 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
CHD1O14646 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
CHD1O14646 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
CHD1O14646 POM121L10P-201ENST00000436994 1285 ntBASIC26.02■■□□□ 1.76
CHD1O14646 AC104784.1-201ENST00000473096 294 ntBASIC26.02■■□□□ 1.76
CHD1O14646 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC26.02■■□□□ 1.76
CHD1O14646 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
CHD1O14646 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
CHD1O14646 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC26.02■■□□□ 1.76
CHD1O14646 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC26.02■■□□□ 1.76
CHD1O14646 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC26.02■■□□□ 1.76
CHD1O14646 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC26.02■■□□□ 1.76
CHD1O14646 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC26.01■■□□□ 1.76
CHD1O14646 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
CHD1O14646 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC26.01■■□□□ 1.75
CHD1O14646 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC26.01■■□□□ 1.75
CHD1O14646 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC26.01■■□□□ 1.75
CHD1O14646 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
CHD1O14646 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC26.01■■□□□ 1.75
CHD1O14646 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC26.01■■□□□ 1.75
CHD1O14646 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC26.01■■□□□ 1.75
CHD1O14646 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC26.01■■□□□ 1.75
CHD1O14646 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC26.01■■□□□ 1.75
CHD1O14646 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC26.01■■□□□ 1.75
CHD1O14646 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC26.01■■□□□ 1.75
CHD1O14646 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC26.01■■□□□ 1.75
CHD1O14646 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC26.01■■□□□ 1.75
CHD1O14646 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC26.01■■□□□ 1.75
CHD1O14646 AL354751.1-201ENST00000412768 1863 ntBASIC26.01■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms